Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.74■□□□□ 0.43
CXCR4P61073 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.74■□□□□ 0.43
CXCR4P61073 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CXCR4P61073 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.73■□□□□ 0.43
CXCR4P61073 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.73■□□□□ 0.43
CXCR4P61073 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.73■□□□□ 0.43
CXCR4P61073 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.73■□□□□ 0.43
CXCR4P61073 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.73■□□□□ 0.43
CXCR4P61073 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.73■□□□□ 0.43
CXCR4P61073 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.73■□□□□ 0.43
CXCR4P61073 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.73■□□□□ 0.43
CXCR4P61073 TEX21P-204ENST00000641479 1693 ntBASIC17.73■□□□□ 0.43
CXCR4P61073 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCR4P61073 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.73■□□□□ 0.43
CXCR4P61073 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CXCR4P61073 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.72■□□□□ 0.43
CXCR4P61073 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CXCR4P61073 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.72■□□□□ 0.43
CXCR4P61073 AC068880.1-201ENST00000507289 2297 ntBASIC17.72■□□□□ 0.43
CXCR4P61073 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.72■□□□□ 0.43
CXCR4P61073 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.72■□□□□ 0.43
CXCR4P61073 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.72■□□□□ 0.43
CXCR4P61073 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.72■□□□□ 0.43
CXCR4P61073 MYCNOS-205ENST00000641950 531 ntBASIC17.72■□□□□ 0.43
CXCR4P61073 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CXCR4P61073 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.72■□□□□ 0.43
CXCR4P61073 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.72■□□□□ 0.43
CXCR4P61073 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCR4P61073 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.72■□□□□ 0.43
CXCR4P61073 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.71■□□□□ 0.43
CXCR4P61073 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CXCR4P61073 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 PHGDH-210ENST00000641115 1638 ntBASIC17.71■□□□□ 0.43
CXCR4P61073 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCR4P61073 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.71■□□□□ 0.43
CXCR4P61073 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCR4P61073 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.71■□□□□ 0.42
CXCR4P61073 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CXCR4P61073 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CXCR4P61073 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.71■□□□□ 0.42
CXCR4P61073 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCR4P61073 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms