Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC10.46□□□□□ -0.73
SEC61BP60468 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
SEC61BP60468 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
SEC61BP60468 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SEC61BP60468 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SEC61BP60468 AC011506.1-201ENST00000474329 610 ntBASIC10.46□□□□□ -0.73
SEC61BP60468 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SEC61BP60468 DUX4L26-201ENST00000489078 1255 ntBASIC10.46□□□□□ -0.73
SEC61BP60468 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SEC61BP60468 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC10.46□□□□□ -0.73
SEC61BP60468 CFL2-205ENST00000555765 632 ntTSL 2 BASIC10.46□□□□□ -0.73
SEC61BP60468 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SEC61BP60468 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SEC61BP60468 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC10.46□□□□□ -0.73
SEC61BP60468 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SEC61BP60468 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC10.46□□□□□ -0.74
SEC61BP60468 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC10.46□□□□□ -0.74
SEC61BP60468 KRT8P8-201ENST00000434750 1448 ntBASIC10.46□□□□□ -0.74
SEC61BP60468 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC10.46□□□□□ -0.74
SEC61BP60468 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 RCC2P6-201ENST00000526625 1557 ntBASIC10.46□□□□□ -0.74
SEC61BP60468 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC10.46□□□□□ -0.74
SEC61BP60468 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 AP001271.2-201ENST00000624018 1556 ntBASIC10.46□□□□□ -0.74
SEC61BP60468 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.74
SEC61BP60468 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC10.46□□□□□ -0.74
SEC61BP60468 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC10.46□□□□□ -0.74
SEC61BP60468 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SEC61BP60468 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SEC61BP60468 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
SEC61BP60468 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 GOLGA2P11-201ENST00000562660 1621 ntBASIC10.45□□□□□ -0.74
SEC61BP60468 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 HIST1H2APS4-201ENST00000362070 348 ntBASIC10.45□□□□□ -0.74
SEC61BP60468 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
SEC61BP60468 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC10.45□□□□□ -0.74
SEC61BP60468 MFAP1P1-201ENST00000442257 1255 ntBASIC10.45□□□□□ -0.74
SEC61BP60468 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 ECEL1P2-202ENST00000465689 757 ntBASIC10.45□□□□□ -0.74
SEC61BP60468 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC10.45□□□□□ -0.74
SEC61BP60468 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 NME1-207ENST00000480143 964 ntTSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SEC61BP60468 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
SEC61BP60468 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC10.45□□□□□ -0.74
SEC61BP60468 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
SEC61BP60468 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SEC61BP60468 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC10.45□□□□□ -0.74
SEC61BP60468 BID-203ENST00000399765 1879 ntTSL 2 BASIC10.44□□□□□ -0.74
SEC61BP60468 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SEC61BP60468 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.44□□□□□ -0.74
SEC61BP60468 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SEC61BP60468 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SEC61BP60468 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC10.44□□□□□ -0.74
SEC61BP60468 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
SEC61BP60468 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC10.44□□□□□ -0.74
SEC61BP60468 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SEC61BP60468 EP400NL-214ENST00000641289 2402 ntBASIC10.44□□□□□ -0.74
SEC61BP60468 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SEC61BP60468 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC10.44□□□□□ -0.74
SEC61BP60468 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SEC61BP60468 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC10.44□□□□□ -0.74
SEC61BP60468 MESTP1-201ENST00000404287 994 ntBASIC10.44□□□□□ -0.74
SEC61BP60468 AK4P3-201ENST00000418260 669 ntBASIC10.44□□□□□ -0.74
SEC61BP60468 DERL1-203ENST00000419562 918 ntTSL 2 BASIC10.44□□□□□ -0.74
SEC61BP60468 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms