Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC113410.3-201ENST00000623366 203 ntBASIC21.48■■□□□ 1.03
PEX3P56589 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX3P56589 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.48■■□□□ 1.03
PEX3P56589 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
PEX3P56589 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.48■■□□□ 1.03
PEX3P56589 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PEX3P56589 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PEX3P56589 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PEX3P56589 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PEX3P56589 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.47■■□□□ 1.03
PEX3P56589 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX3P56589 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
PEX3P56589 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX3P56589 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.47■■□□□ 1.03
PEX3P56589 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.47■■□□□ 1.03
PEX3P56589 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.47■■□□□ 1.03
PEX3P56589 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX3P56589 AC073195.1-201ENST00000607241 877 ntBASIC21.47■■□□□ 1.03
PEX3P56589 AP001412.1-201ENST00000608405 714 ntBASIC21.47■■□□□ 1.03
PEX3P56589 HLA-A-209ENST00000638375 975 ntBASIC21.47■■□□□ 1.03
PEX3P56589 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.47■■□□□ 1.03
PEX3P56589 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX3P56589 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX3P56589 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX3P56589 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PEX3P56589 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PEX3P56589 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PEX3P56589 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PEX3P56589 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.46■■□□□ 1.03
PEX3P56589 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PEX3P56589 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PEX3P56589 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PEX3P56589 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 FAM197Y1-201ENST00000421178 764 ntBASIC21.46■■□□□ 1.03
PEX3P56589 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PEX3P56589 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.46■■□□□ 1.03
PEX3P56589 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.46■■□□□ 1.03
PEX3P56589 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.45■■□□□ 1.02
PEX3P56589 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PEX3P56589 AL596275.1-201ENST00000423464 877 ntBASIC21.45■■□□□ 1.02
PEX3P56589 KSR1P1-201ENST00000446298 240 ntBASIC21.45■■□□□ 1.02
PEX3P56589 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PEX3P56589 SNORA78-201ENST00000459373 127 ntBASIC21.45■■□□□ 1.02
PEX3P56589 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PEX3P56589 CD177P1-201ENST00000606252 935 ntBASIC21.45■■□□□ 1.02
PEX3P56589 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.45■■□□□ 1.02
PEX3P56589 CR392000.1-201ENST00000624770 1228 ntBASIC21.45■■□□□ 1.02
PEX3P56589 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.45■■□□□ 1.02
PEX3P56589 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.45■■□□□ 1.02
PEX3P56589 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
PEX3P56589 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PEX3P56589 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.44■■□□□ 1.02
PEX3P56589 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.44■■□□□ 1.02
PEX3P56589 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 TSPY7P-201ENST00000431358 1114 ntBASIC21.44■■□□□ 1.02
PEX3P56589 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.44■■□□□ 1.02
PEX3P56589 LINC01465-201ENST00000408887 1940 ntBASIC21.44■■□□□ 1.02
PEX3P56589 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PEX3P56589 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PEX3P56589 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.44■■□□□ 1.02
PEX3P56589 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms