Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.48■□□□□ 0.39
GFRA1P56159 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.48■□□□□ 0.39
GFRA1P56159 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.48■□□□□ 0.39
GFRA1P56159 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 AC079598.2-202ENST00000546624 1451 ntBASIC17.48■□□□□ 0.39
GFRA1P56159 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GFRA1P56159 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GFRA1P56159 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GFRA1P56159 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.48■□□□□ 0.39
GFRA1P56159 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GFRA1P56159 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.47■□□□□ 0.39
GFRA1P56159 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GFRA1P56159 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 AC011506.1-201ENST00000474329 610 ntBASIC17.47■□□□□ 0.39
GFRA1P56159 Z85996.1-201ENST00000494644 937 ntBASIC17.47■□□□□ 0.39
GFRA1P56159 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.47■□□□□ 0.39
GFRA1P56159 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.47■□□□□ 0.39
GFRA1P56159 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.47■□□□□ 0.39
GFRA1P56159 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.47■□□□□ 0.39
GFRA1P56159 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.47■□□□□ 0.39
GFRA1P56159 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.47■□□□□ 0.39
GFRA1P56159 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA1P56159 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.47■□□□□ 0.39
GFRA1P56159 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
GFRA1P56159 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 RCC2P6-201ENST00000526625 1557 ntBASIC17.46■□□□□ 0.39
GFRA1P56159 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA1P56159 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
GFRA1P56159 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA1P56159 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.46■□□□□ 0.39
GFRA1P56159 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.46■□□□□ 0.39
GFRA1P56159 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 AL160286.2-201ENST00000567150 934 ntBASIC17.46■□□□□ 0.39
GFRA1P56159 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.46■□□□□ 0.39
GFRA1P56159 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.46■□□□□ 0.39
GFRA1P56159 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA1P56159 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.46■□□□□ 0.39
GFRA1P56159 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA1P56159 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GFRA1P56159 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GFRA1P56159 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.46■□□□□ 0.39
GFRA1P56159 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA1P56159 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.46■□□□□ 0.39
GFRA1P56159 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GFRA1P56159 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.46■□□□□ 0.38
GFRA1P56159 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GFRA1P56159 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA1P56159 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA1P56159 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA1P56159 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA1P56159 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA1P56159 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GFRA1P56159 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA1P56159 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
GFRA1P56159 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA1P56159 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.45■□□□□ 0.38
GFRA1P56159 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA1P56159 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA1P56159 AP000525.1-201ENST00000608286 694 ntBASIC17.45■□□□□ 0.38
GFRA1P56159 DGCR10-201ENST00000609839 495 ntBASIC17.45■□□□□ 0.38
GFRA1P56159 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
GFRA1P56159 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GFRA1P56159 AC130371.2-201ENST00000619443 611 ntBASIC17.45■□□□□ 0.38
GFRA1P56159 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA1P56159 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA1P56159 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA1P56159 LINC01465-201ENST00000408887 1940 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms