Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN1P54253 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ATXN1P54253 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.44■□□□□ 0.86
ATXN1P54253 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.44■□□□□ 0.86
ATXN1P54253 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
ATXN1P54253 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.44■□□□□ 0.86
ATXN1P54253 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN1P54253 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.44■□□□□ 0.86
ATXN1P54253 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.44■□□□□ 0.86
ATXN1P54253 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.44■□□□□ 0.86
ATXN1P54253 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN1P54253 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ATXN1P54253 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN1P54253 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN1P54253 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN1P54253 AL135905.2-201ENST00000584934 1404 ntBASIC20.44■□□□□ 0.86
ATXN1P54253 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATXN1P54253 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.43■□□□□ 0.86
ATXN1P54253 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ATXN1P54253 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.43■□□□□ 0.86
ATXN1P54253 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ATXN1P54253 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.43■□□□□ 0.86
ATXN1P54253 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.43■□□□□ 0.86
ATXN1P54253 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
ATXN1P54253 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.43■□□□□ 0.86
ATXN1P54253 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.43■□□□□ 0.86
ATXN1P54253 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ATXN1P54253 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.43■□□□□ 0.86
ATXN1P54253 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ATXN1P54253 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATXN1P54253 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.42■□□□□ 0.86
ATXN1P54253 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ATXN1P54253 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
ATXN1P54253 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.42■□□□□ 0.86
ATXN1P54253 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.42■□□□□ 0.86
ATXN1P54253 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.42■□□□□ 0.86
ATXN1P54253 AL353708.3-201ENST00000610272 989 ntBASIC20.42■□□□□ 0.86
ATXN1P54253 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATXN1P54253 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ATXN1P54253 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.42■□□□□ 0.86
ATXN1P54253 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.41■□□□□ 0.86
ATXN1P54253 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
ATXN1P54253 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 KRASP1-201ENST00000407852 552 ntBASIC20.41■□□□□ 0.86
ATXN1P54253 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.41■□□□□ 0.86
ATXN1P54253 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.41■□□□□ 0.86
ATXN1P54253 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ATXN1P54253 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.41■□□□□ 0.86
ATXN1P54253 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.41■□□□□ 0.86
ATXN1P54253 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.41■□□□□ 0.86
ATXN1P54253 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATXN1P54253 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.41■□□□□ 0.86
ATXN1P54253 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ATXN1P54253 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN1P54253 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.4■□□□□ 0.86
ATXN1P54253 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATXN1P54253 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN1P54253 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN1P54253 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms