Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.07■□□□□ 0.8
COPAP53621 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 SMG8-203ENST00000578922 2178 ntBASIC20.07■□□□□ 0.8
COPAP53621 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
COPAP53621 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.07■□□□□ 0.8
COPAP53621 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.07■□□□□ 0.8
COPAP53621 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COPAP53621 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.07■□□□□ 0.8
COPAP53621 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COPAP53621 AC004264.1-201ENST00000608354 794 ntBASIC20.07■□□□□ 0.8
COPAP53621 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.07■□□□□ 0.8
COPAP53621 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.07■□□□□ 0.8
COPAP53621 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COPAP53621 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COPAP53621 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.07■□□□□ 0.8
COPAP53621 AC099778.1-201ENST00000568593 1911 ntBASIC20.07■□□□□ 0.8
COPAP53621 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.07■□□□□ 0.8
COPAP53621 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COPAP53621 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COPAP53621 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COPAP53621 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COPAP53621 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COPAP53621 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 FAM197Y1-201ENST00000421178 764 ntBASIC20.06■□□□□ 0.8
COPAP53621 FAM210CP-201ENST00000445714 574 ntBASIC20.06■□□□□ 0.8
COPAP53621 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.06■□□□□ 0.8
COPAP53621 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.06■□□□□ 0.8
COPAP53621 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.06■□□□□ 0.8
COPAP53621 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.06■□□□□ 0.8
COPAP53621 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COPAP53621 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COPAP53621 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COPAP53621 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COPAP53621 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.05■□□□□ 0.8
COPAP53621 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.05■□□□□ 0.8
COPAP53621 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.05■□□□□ 0.8
COPAP53621 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COPAP53621 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
COPAP53621 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.05■□□□□ 0.8
COPAP53621 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.05■□□□□ 0.8
COPAP53621 AC073195.1-201ENST00000607241 877 ntBASIC20.05■□□□□ 0.8
COPAP53621 AC133561.5-201ENST00000635547 218 ntBASIC20.05■□□□□ 0.8
COPAP53621 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COPAP53621 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COPAP53621 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
COPAP53621 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.05■□□□□ 0.8
COPAP53621 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.04■□□□□ 0.8
COPAP53621 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
COPAP53621 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.04■□□□□ 0.8
COPAP53621 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 AL355355.2-201ENST00000442321 338 ntBASIC20.04■□□□□ 0.8
COPAP53621 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.04■□□□□ 0.8
COPAP53621 AC012306.2-201ENST00000609350 630 ntBASIC20.04■□□□□ 0.8
COPAP53621 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COPAP53621 DPP3P2-201ENST00000416030 1696 ntBASIC20.03■□□□□ 0.8
COPAP53621 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
COPAP53621 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPAP53621 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.03■□□□□ 0.8
COPAP53621 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPAP53621 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COPAP53621 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COPAP53621 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COPAP53621 AL353708.3-201ENST00000610272 989 ntBASIC20.03■□□□□ 0.8
COPAP53621 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.03■□□□□ 0.8
COPAP53621 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.03■□□□□ 0.8
COPAP53621 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms