Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC25A1P53007 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SLC25A1P53007 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC25A1P53007 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC25A1P53007 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC25A1P53007 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.29■□□□□ 0.36
SLC25A1P53007 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 AC083906.2-201ENST00000511578 360 ntBASIC17.29■□□□□ 0.36
SLC25A1P53007 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC25A1P53007 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.29■□□□□ 0.36
SLC25A1P53007 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC25A1P53007 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC25A1P53007 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SLC25A1P53007 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.28■□□□□ 0.36
SLC25A1P53007 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC25A1P53007 YBX1P10-201ENST00000444752 975 ntBASIC17.28■□□□□ 0.36
SLC25A1P53007 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC25A1P53007 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC25A1P53007 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 AL121906.2-201ENST00000621597 723 ntBASIC17.28■□□□□ 0.36
SLC25A1P53007 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC25A1P53007 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
SLC25A1P53007 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC25A1P53007 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC25A1P53007 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 AP006587.1-201ENST00000534129 1502 ntBASIC17.27■□□□□ 0.36
SLC25A1P53007 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC25A1P53007 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC25A1P53007 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 AC124283.5-201ENST00000624661 1809 ntBASIC17.27■□□□□ 0.36
SLC25A1P53007 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC25A1P53007 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC25A1P53007 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC25A1P53007 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC25A1P53007 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SLC25A1P53007 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC25A1P53007 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC25A1P53007 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC25A1P53007 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC25A1P53007 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC25A1P53007 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC25A1P53007 KRT8P8-201ENST00000434750 1448 ntBASIC17.27■□□□□ 0.35
SLC25A1P53007 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.27■□□□□ 0.35
SLC25A1P53007 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC25A1P53007 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC25A1P53007 CROCCP3-202ENST00000420820 1947 ntBASIC17.27■□□□□ 0.35
SLC25A1P53007 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC25A1P53007 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC25A1P53007 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC25A1P53007 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC25A1P53007 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC25A1P53007 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC25A1P53007 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms