Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2AP49459 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
UBE2AP49459 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.34□□□□□ -0.43
UBE2AP49459 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UBE2AP49459 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.34□□□□□ -0.43
UBE2AP49459 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2AP49459 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2AP49459 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
UBE2AP49459 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2AP49459 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UBE2AP49459 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 MKRN4P-201ENST00000444706 1521 ntBASIC12.33□□□□□ -0.44
UBE2AP49459 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2AP49459 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 AL512625.2-201ENST00000417533 625 ntBASIC12.33□□□□□ -0.44
UBE2AP49459 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 AC105036.2-201ENST00000569468 176 ntBASIC12.33□□□□□ -0.44
UBE2AP49459 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2AP49459 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2AP49459 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2AP49459 TMEM179-206ENST00000616017 1645 ntBASIC12.33□□□□□ -0.44
UBE2AP49459 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2AP49459 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2AP49459 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBE2AP49459 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2AP49459 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2AP49459 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2AP49459 AC026185.1-201ENST00000445748 174 ntBASIC12.32□□□□□ -0.44
UBE2AP49459 AC006970.2-201ENST00000450065 779 ntBASIC12.32□□□□□ -0.44
UBE2AP49459 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 AF201337.1-201ENST00000520239 748 ntBASIC12.32□□□□□ -0.44
UBE2AP49459 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBE2AP49459 C2orf69P4-201ENST00000565394 541 ntBASIC12.32□□□□□ -0.44
UBE2AP49459 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.32□□□□□ -0.44
UBE2AP49459 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 AC073111.5-205ENST00000641717 521 ntBASIC12.32□□□□□ -0.44
UBE2AP49459 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
UBE2AP49459 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
UBE2AP49459 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.32□□□□□ -0.44
UBE2AP49459 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2AP49459 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBE2AP49459 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2AP49459 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2AP49459 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2AP49459 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
UBE2AP49459 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2AP49459 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
UBE2AP49459 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2AP49459 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2AP49459 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2AP49459 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2AP49459 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.31□□□□□ -0.44
UBE2AP49459 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2AP49459 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms