Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL160237.2-201ENST00000556165 472 ntBASIC21.97■■□□□ 1.11
HTTP42858 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HTTP42858 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HTTP42858 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HTTP42858 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HTTP42858 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.97■■□□□ 1.11
HTTP42858 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
HTTP42858 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HTTP42858 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HTTP42858 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HTTP42858 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.97■■□□□ 1.11
HTTP42858 TUBB8P6-201ENST00000436895 1288 ntBASIC21.97■■□□□ 1.11
HTTP42858 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.97■■□□□ 1.11
HTTP42858 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
HTTP42858 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTTP42858 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
HTTP42858 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTTP42858 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.96■■□□□ 1.11
HTTP42858 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTTP42858 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.96■■□□□ 1.11
HTTP42858 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HTTP42858 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTTP42858 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HTTP42858 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
HTTP42858 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HTTP42858 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
HTTP42858 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTTP42858 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.96■■□□□ 1.11
HTTP42858 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HTTP42858 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.96■■□□□ 1.11
HTTP42858 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
HTTP42858 HLA-A-201ENST00000376802 1334 ntBASIC21.96■■□□□ 1.11
HTTP42858 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.96■■□□□ 1.11
HTTP42858 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.96■■□□□ 1.11
HTTP42858 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.96■■□□□ 1.11
HTTP42858 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
HTTP42858 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.95■■□□□ 1.11
HTTP42858 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.95■■□□□ 1.11
HTTP42858 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.95■■□□□ 1.11
HTTP42858 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
HTTP42858 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 AP002414.4-201ENST00000589764 1148 ntBASIC21.95■■□□□ 1.1
HTTP42858 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.95■■□□□ 1.1
HTTP42858 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 Z98882.1-201ENST00000622160 2253 ntBASIC21.95■■□□□ 1.1
HTTP42858 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTTP42858 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HTTP42858 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.95■■□□□ 1.1
HTTP42858 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
HTTP42858 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HTTP42858 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 AC120114.3-201ENST00000611923 658 ntBASIC21.94■■□□□ 1.1
HTTP42858 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.94■■□□□ 1.1
HTTP42858 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HTTP42858 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 PMS2P1-201ENST00000431037 1228 ntBASIC21.94■■□□□ 1.1
HTTP42858 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.94■■□□□ 1.1
HTTP42858 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.94■■□□□ 1.1
HTTP42858 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
HTTP42858 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.94■■□□□ 1.1
HTTP42858 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HTTP42858 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.93■■□□□ 1.1
HTTP42858 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.93■■□□□ 1.1
HTTP42858 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HTTP42858 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.93■■□□□ 1.1
HTTP42858 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.93■■□□□ 1.1
HTTP42858 AC011498.5-201ENST00000592027 486 ntBASIC21.93■■□□□ 1.1
HTTP42858 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.93■■□□□ 1.1
HTTP42858 FBXW4P1-201ENST00000426721 2239 ntBASIC21.93■■□□□ 1.1
HTTP42858 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HTTP42858 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.93■■□□□ 1.1
HTTP42858 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.93■■□□□ 1.1
HTTP42858 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
HTTP42858 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.93■■□□□ 1.1
HTTP42858 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HTTP42858 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.93■■□□□ 1.1
HTTP42858 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.93■■□□□ 1.1
HTTP42858 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.92■■□□□ 1.1
HTTP42858 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
HTTP42858 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.92■■□□□ 1.1
HTTP42858 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
HTTP42858 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HTTP42858 KRT18P13-201ENST00000400056 1290 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms