Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
CCKBRP32239 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.7■□□□□ 0.58
CCKBRP32239 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCKBRP32239 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.69■□□□□ 0.58
CCKBRP32239 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCKBRP32239 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.69■□□□□ 0.58
CCKBRP32239 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.69■□□□□ 0.58
CCKBRP32239 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCKBRP32239 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.69■□□□□ 0.58
CCKBRP32239 HMGA1P5-201ENST00000412453 271 ntBASIC18.69■□□□□ 0.58
CCKBRP32239 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.69■□□□□ 0.58
CCKBRP32239 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.69■□□□□ 0.58
CCKBRP32239 AC087388.1-201ENST00000571370 1112 ntBASIC18.69■□□□□ 0.58
CCKBRP32239 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.69■□□□□ 0.58
CCKBRP32239 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.69■□□□□ 0.58
CCKBRP32239 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.69■□□□□ 0.58
CCKBRP32239 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCKBRP32239 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCKBRP32239 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCKBRP32239 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.69■□□□□ 0.58
CCKBRP32239 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCKBRP32239 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CCKBRP32239 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCKBRP32239 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCKBRP32239 FAM207BP-201ENST00000447172 505 ntBASIC18.68■□□□□ 0.58
CCKBRP32239 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 WWOX-216ENST00000569818 525 ntBASIC18.68■□□□□ 0.58
CCKBRP32239 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 AC116562.4-202ENST00000641738 218 ntBASIC18.68■□□□□ 0.58
CCKBRP32239 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.68■□□□□ 0.58
CCKBRP32239 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCKBRP32239 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCKBRP32239 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.68■□□□□ 0.58
CCKBRP32239 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCKBRP32239 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCKBRP32239 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CCKBRP32239 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 MFAP1P1-201ENST00000442257 1255 ntBASIC18.67■□□□□ 0.58
CCKBRP32239 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.67■□□□□ 0.58
CCKBRP32239 AC008040.2-201ENST00000461049 708 ntBASIC18.67■□□□□ 0.58
CCKBRP32239 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.67■□□□□ 0.58
CCKBRP32239 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCKBRP32239 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CCKBRP32239 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CCKBRP32239 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.67■□□□□ 0.58
CCKBRP32239 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCKBRP32239 SLC25A24-204ENST00000569674 2357 ntBASIC18.67■□□□□ 0.58
CCKBRP32239 TMEM179-206ENST00000616017 1645 ntBASIC18.67■□□□□ 0.58
CCKBRP32239 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.66■□□□□ 0.58
CCKBRP32239 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.66■□□□□ 0.58
CCKBRP32239 INGX-201ENST00000359239 846 ntBASIC18.66■□□□□ 0.58
CCKBRP32239 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CCKBRP32239 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.66■□□□□ 0.58
CCKBRP32239 SLC25A1P2-201ENST00000430693 912 ntBASIC18.66■□□□□ 0.58
CCKBRP32239 CCR12P-201ENST00000446203 998 ntBASIC18.66■□□□□ 0.58
CCKBRP32239 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCKBRP32239 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.66■□□□□ 0.58
CCKBRP32239 LINC01238-205ENST00000567549 1107 ntBASIC18.66■□□□□ 0.58
CCKBRP32239 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.66■□□□□ 0.58
CCKBRP32239 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCKBRP32239 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms