Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TREX1-205ENST00000625293 1783 ntBASIC17.96■□□□□ 0.47
ABCD3P28288 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ABCD3P28288 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.96■□□□□ 0.47
ABCD3P28288 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ABCD3P28288 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.96■□□□□ 0.47
ABCD3P28288 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ABCD3P28288 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.96■□□□□ 0.46
ABCD3P28288 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCD3P28288 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCD3P28288 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCD3P28288 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 RPS2P55-201ENST00000397318 883 ntBASIC17.95■□□□□ 0.46
ABCD3P28288 AC012618.2-201ENST00000428058 849 ntBASIC17.95■□□□□ 0.46
ABCD3P28288 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.95■□□□□ 0.46
ABCD3P28288 AP002982.1-201ENST00000492365 877 ntBASIC17.95■□□□□ 0.46
ABCD3P28288 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.95■□□□□ 0.46
ABCD3P28288 AC107956.1-201ENST00000494359 873 ntBASIC17.95■□□□□ 0.46
ABCD3P28288 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.95■□□□□ 0.46
ABCD3P28288 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCD3P28288 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.95■□□□□ 0.46
ABCD3P28288 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.95■□□□□ 0.46
ABCD3P28288 AF186192.3-201ENST00000583427 947 ntBASIC17.95■□□□□ 0.46
ABCD3P28288 AL353708.3-201ENST00000610272 989 ntBASIC17.95■□□□□ 0.46
ABCD3P28288 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCD3P28288 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.95■□□□□ 0.46
ABCD3P28288 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.95■□□□□ 0.46
ABCD3P28288 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ABCD3P28288 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ABCD3P28288 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ABCD3P28288 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.95■□□□□ 0.46
ABCD3P28288 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ABCD3P28288 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ABCD3P28288 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.94■□□□□ 0.46
ABCD3P28288 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ABCD3P28288 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ABCD3P28288 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.94■□□□□ 0.46
ABCD3P28288 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 MIR718-201ENST00000390190 70 ntBASIC17.94■□□□□ 0.46
ABCD3P28288 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.94■□□□□ 0.46
ABCD3P28288 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 AC233702.5-201ENST00000584107 538 ntBASIC17.94■□□□□ 0.46
ABCD3P28288 Z99916.2-201ENST00000604037 246 ntBASIC17.94■□□□□ 0.46
ABCD3P28288 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.94■□□□□ 0.46
ABCD3P28288 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.94■□□□□ 0.46
ABCD3P28288 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ABCD3P28288 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ABCD3P28288 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ABCD3P28288 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 NIFKP9-201ENST00000419265 221 ntBASIC17.93■□□□□ 0.46
ABCD3P28288 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.93■□□□□ 0.46
ABCD3P28288 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 AC093827.2-201ENST00000512654 315 ntBASIC17.93■□□□□ 0.46
ABCD3P28288 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCD3P28288 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCD3P28288 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.93■□□□□ 0.46
ABCD3P28288 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCD3P28288 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.93■□□□□ 0.46
ABCD3P28288 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.93■□□□□ 0.46
ABCD3P28288 AL158211.5-201ENST00000623583 2518 ntBASIC17.93■□□□□ 0.46
ABCD3P28288 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ABCD3P28288 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.92■□□□□ 0.46
ABCD3P28288 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ABCD3P28288 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ABCD3P28288 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms