Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.8■□□□□ 0.28
CD40P25942 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.8■□□□□ 0.28
CD40P25942 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.8■□□□□ 0.28
CD40P25942 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.8■□□□□ 0.28
CD40P25942 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.8■□□□□ 0.28
CD40P25942 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.8■□□□□ 0.28
CD40P25942 DGCR10-201ENST00000609839 495 ntBASIC16.8■□□□□ 0.28
CD40P25942 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CD40P25942 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.8■□□□□ 0.28
CD40P25942 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.8■□□□□ 0.28
CD40P25942 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CD40P25942 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 TCF3P1-201ENST00000423021 1937 ntBASIC16.8■□□□□ 0.28
CD40P25942 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CD40P25942 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CD40P25942 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CD40P25942 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.79■□□□□ 0.28
CD40P25942 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.79■□□□□ 0.28
CD40P25942 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CD40P25942 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.79■□□□□ 0.28
CD40P25942 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD40P25942 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CD40P25942 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.79■□□□□ 0.28
CD40P25942 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CD40P25942 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.79■□□□□ 0.28
CD40P25942 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 AL390955.1-201ENST00000428694 934 ntBASIC16.79■□□□□ 0.28
CD40P25942 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.79■□□□□ 0.28
CD40P25942 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.79■□□□□ 0.28
CD40P25942 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.79■□□□□ 0.28
CD40P25942 AC012306.2-201ENST00000609350 630 ntBASIC16.79■□□□□ 0.28
CD40P25942 AC130371.2-201ENST00000619443 611 ntBASIC16.79■□□□□ 0.28
CD40P25942 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.79■□□□□ 0.28
CD40P25942 RCC2P6-201ENST00000526625 1557 ntBASIC16.79■□□□□ 0.28
CD40P25942 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD40P25942 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD40P25942 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CD40P25942 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.79■□□□□ 0.28
CD40P25942 KRT8P9-201ENST00000558927 1449 ntBASIC16.79■□□□□ 0.28
CD40P25942 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD40P25942 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CD40P25942 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD40P25942 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD40P25942 AC004951.3-201ENST00000418645 1148 ntBASIC16.78■□□□□ 0.28
CD40P25942 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.78■□□□□ 0.28
CD40P25942 AL160286.2-201ENST00000567150 934 ntBASIC16.78■□□□□ 0.28
CD40P25942 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CD40P25942 AC011298.2-201ENST00000617989 482 ntBASIC16.78■□□□□ 0.28
CD40P25942 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.78■□□□□ 0.28
CD40P25942 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.78■□□□□ 0.28
CD40P25942 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.78■□□□□ 0.28
CD40P25942 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.78■□□□□ 0.28
CD40P25942 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.78■□□□□ 0.28
CD40P25942 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD40P25942 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CD40P25942 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CD40P25942 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD40P25942 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CD40P25942 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.77■□□□□ 0.28
CD40P25942 LINC01521-201ENST00000504184 1943 ntBASIC16.77■□□□□ 0.28
CD40P25942 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.77■□□□□ 0.28
CD40P25942 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.77■□□□□ 0.28
CD40P25942 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms