Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBL4AP11441 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBL4AP11441 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4AP11441 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UBL4AP11441 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
UBL4AP11441 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 POM121L13P-201ENST00000422362 380 ntBASIC17.99■□□□□ 0.47
UBL4AP11441 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4AP11441 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4AP11441 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4AP11441 AL121829.2-201ENST00000620908 328 ntBASIC17.99■□□□□ 0.47
UBL4AP11441 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.99■□□□□ 0.47
UBL4AP11441 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UBL4AP11441 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBL4AP11441 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
UBL4AP11441 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4AP11441 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.98■□□□□ 0.47
UBL4AP11441 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
UBL4AP11441 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBL4AP11441 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4AP11441 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.98■□□□□ 0.47
UBL4AP11441 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4AP11441 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
UBL4AP11441 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.98■□□□□ 0.47
UBL4AP11441 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.98■□□□□ 0.47
UBL4AP11441 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4AP11441 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4AP11441 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBL4AP11441 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBL4AP11441 AP006587.1-201ENST00000534129 1502 ntBASIC17.98■□□□□ 0.47
UBL4AP11441 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
UBL4AP11441 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.97■□□□□ 0.47
UBL4AP11441 AC026366.1-201ENST00000488803 879 ntBASIC17.97■□□□□ 0.47
UBL4AP11441 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBL4AP11441 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.96■□□□□ 0.47
UBL4AP11441 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.96■□□□□ 0.47
UBL4AP11441 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.96■□□□□ 0.47
UBL4AP11441 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
UBL4AP11441 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.96■□□□□ 0.47
UBL4AP11441 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.96■□□□□ 0.47
UBL4AP11441 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.96■□□□□ 0.47
UBL4AP11441 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.96■□□□□ 0.47
UBL4AP11441 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.96■□□□□ 0.47
UBL4AP11441 AC008403.3-201ENST00000598924 454 ntBASIC17.96■□□□□ 0.47
UBL4AP11441 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.96■□□□□ 0.47
UBL4AP11441 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.96■□□□□ 0.47
UBL4AP11441 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.96■□□□□ 0.47
UBL4AP11441 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBL4AP11441 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBL4AP11441 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBL4AP11441 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBL4AP11441 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UBL4AP11441 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBL4AP11441 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.95■□□□□ 0.46
UBL4AP11441 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
UBL4AP11441 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
UBL4AP11441 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBL4AP11441 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms