Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.76■□□□□ 0.91
FAM228BP0C875 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM228BP0C875 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FAM228BP0C875 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.76■□□□□ 0.91
FAM228BP0C875 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
FAM228BP0C875 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.75■□□□□ 0.91
FAM228BP0C875 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM228BP0C875 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.75■□□□□ 0.91
FAM228BP0C875 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM228BP0C875 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FAM228BP0C875 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.75■□□□□ 0.91
FAM228BP0C875 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.75■□□□□ 0.91
FAM228BP0C875 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.75■□□□□ 0.91
FAM228BP0C875 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM228BP0C875 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
FAM228BP0C875 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
FAM228BP0C875 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.75■□□□□ 0.91
FAM228BP0C875 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
FAM228BP0C875 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FAM228BP0C875 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
FAM228BP0C875 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
FAM228BP0C875 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
FAM228BP0C875 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FAM228BP0C875 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.74■□□□□ 0.91
FAM228BP0C875 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.74■□□□□ 0.91
FAM228BP0C875 AC006970.2-201ENST00000450065 779 ntBASIC20.74■□□□□ 0.91
FAM228BP0C875 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.74■□□□□ 0.91
FAM228BP0C875 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.74■□□□□ 0.91
FAM228BP0C875 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.74■□□□□ 0.91
FAM228BP0C875 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.74■□□□□ 0.91
FAM228BP0C875 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FAM228BP0C875 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
FAM228BP0C875 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FAM228BP0C875 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
FAM228BP0C875 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.73■□□□□ 0.91
FAM228BP0C875 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.73■□□□□ 0.91
FAM228BP0C875 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.73■□□□□ 0.91
FAM228BP0C875 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FAM228BP0C875 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.73■□□□□ 0.91
FAM228BP0C875 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.73■□□□□ 0.91
FAM228BP0C875 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
FAM228BP0C875 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.73■□□□□ 0.91
FAM228BP0C875 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.73■□□□□ 0.91
FAM228BP0C875 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.73■□□□□ 0.91
FAM228BP0C875 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.73■□□□□ 0.91
FAM228BP0C875 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.73■□□□□ 0.91
FAM228BP0C875 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.73■□□□□ 0.91
FAM228BP0C875 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 AC006333.2-201ENST00000607957 2099 ntBASIC20.73■□□□□ 0.91
FAM228BP0C875 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
FAM228BP0C875 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FAM228BP0C875 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.72■□□□□ 0.91
FAM228BP0C875 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.72■□□□□ 0.91
FAM228BP0C875 SDHAP1-207ENST00000440850 2000 ntBASIC20.72■□□□□ 0.91
FAM228BP0C875 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.72■□□□□ 0.91
FAM228BP0C875 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.72■□□□□ 0.91
FAM228BP0C875 TSPY6P-201ENST00000448518 926 ntBASIC20.72■□□□□ 0.91
FAM228BP0C875 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.72■□□□□ 0.91
FAM228BP0C875 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
FAM228BP0C875 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.72■□□□□ 0.91
FAM228BP0C875 MYC-209ENST00000641252 345 ntBASIC20.72■□□□□ 0.91
FAM228BP0C875 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FAM228BP0C875 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
FAM228BP0C875 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FAM228BP0C875 AC104417.2-201ENST00000562989 1793 ntBASIC20.72■□□□□ 0.91
FAM228BP0C875 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FAM228BP0C875 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FAM228BP0C875 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FAM228BP0C875 AL138781.2-201ENST00000617896 1843 ntBASIC20.71■□□□□ 0.91
FAM228BP0C875 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FAM228BP0C875 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms