Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 OR10C1-204ENST00000622521 1039 ntBASIC17.62■□□□□ 0.41
HMGN1P05114 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HMGN1P05114 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HMGN1P05114 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGN1P05114 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGN1P05114 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.61■□□□□ 0.41
HMGN1P05114 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.61■□□□□ 0.41
HMGN1P05114 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGN1P05114 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGN1P05114 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGN1P05114 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGN1P05114 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMGN1P05114 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGN1P05114 AC116351.2-201ENST00000606540 1585 ntBASIC17.61■□□□□ 0.41
HMGN1P05114 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGN1P05114 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HMGN1P05114 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.6■□□□□ 0.41
HMGN1P05114 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGN1P05114 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.6■□□□□ 0.41
HMGN1P05114 AC231657.2-201ENST00000624556 255 ntBASIC17.6■□□□□ 0.41
HMGN1P05114 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGN1P05114 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGN1P05114 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
HMGN1P05114 AC010980.2-201ENST00000587099 1412 ntBASIC17.6■□□□□ 0.41
HMGN1P05114 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGN1P05114 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGN1P05114 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGN1P05114 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HMGN1P05114 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
HMGN1P05114 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGN1P05114 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGN1P05114 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HMGN1P05114 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGN1P05114 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 AC011767.1-201ENST00000617410 1153 ntBASIC17.59■□□□□ 0.41
HMGN1P05114 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGN1P05114 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGN1P05114 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGN1P05114 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms