Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRAP04437 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRAP04437 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TCRAP04437 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TCRAP04437 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TCRAP04437 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TCRAP04437 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 AC009113.1-201ENST00000570267 2443 ntBASIC14.81□□□□□ -0.04
TCRAP04437 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TCRAP04437 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRAP04437 AC100791.3-201ENST00000617619 330 ntBASIC14.81□□□□□ -0.04
TCRAP04437 AC010536.3-201ENST00000620306 533 ntBASIC14.81□□□□□ -0.04
TCRAP04437 AC105020.6-201ENST00000621523 1217 ntBASIC14.81□□□□□ -0.04
TCRAP04437 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRAP04437 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.81□□□□□ -0.04
TCRAP04437 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRAP04437 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRAP04437 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRAP04437 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRAP04437 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRAP04437 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRAP04437 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRAP04437 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.8□□□□□ -0.04
TCRAP04437 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.8□□□□□ -0.04
TCRAP04437 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRAP04437 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRAP04437 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TCRAP04437 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRAP04437 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRAP04437 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.79□□□□□ -0.04
TCRAP04437 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.79□□□□□ -0.04
TCRAP04437 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms