Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCRP04035 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGCRP04035 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGCRP04035 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGCRP04035 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCRP04035 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
HMGCRP04035 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCRP04035 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGCRP04035 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HMGCRP04035 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGCRP04035 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HMGCRP04035 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22■■□□□ 1.11
HMGCRP04035 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22■■□□□ 1.11
HMGCRP04035 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22■■□□□ 1.11
HMGCRP04035 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22■■□□□ 1.11
HMGCRP04035 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22■■□□□ 1.11
HMGCRP04035 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22■■□□□ 1.11
HMGCRP04035 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22■■□□□ 1.11
HMGCRP04035 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22■■□□□ 1.11
HMGCRP04035 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22■■□□□ 1.11
HMGCRP04035 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22■■□□□ 1.11
HMGCRP04035 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
HMGCRP04035 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22■■□□□ 1.11
HMGCRP04035 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22■■□□□ 1.11
HMGCRP04035 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22■■□□□ 1.11
HMGCRP04035 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22■■□□□ 1.11
HMGCRP04035 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22■■□□□ 1.11
HMGCRP04035 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.99■■□□□ 1.11
HMGCRP04035 PLK5-205ENST00000642079 1969 ntBASIC21.99■■□□□ 1.11
HMGCRP04035 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HMGCRP04035 TMEM179-206ENST00000616017 1645 ntBASIC21.99■■□□□ 1.11
HMGCRP04035 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.99■■□□□ 1.11
HMGCRP04035 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 AP000523.1-201ENST00000398242 1049 ntBASIC21.99■■□□□ 1.11
HMGCRP04035 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 AP003041.3-201ENST00000527151 707 ntBASIC21.99■■□□□ 1.11
HMGCRP04035 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.99■■□□□ 1.11
HMGCRP04035 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
HMGCRP04035 AC012313.10-201ENST00000623509 926 ntBASIC21.99■■□□□ 1.11
HMGCRP04035 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.99■■□□□ 1.11
HMGCRP04035 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.99■■□□□ 1.11
HMGCRP04035 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCRP04035 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.99■■□□□ 1.11
HMGCRP04035 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HMGCRP04035 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
HMGCRP04035 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
HMGCRP04035 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.98■■□□□ 1.11
HMGCRP04035 AC112907.2-201ENST00000448639 330 ntBASIC21.98■■□□□ 1.11
HMGCRP04035 ZNF444P1-201ENST00000559497 298 ntBASIC21.98■■□□□ 1.11
HMGCRP04035 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCRP04035 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.98■■□□□ 1.11
HMGCRP04035 AC083849.1-201ENST00000615227 514 ntBASIC21.98■■□□□ 1.11
HMGCRP04035 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCRP04035 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCRP04035 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCRP04035 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
HMGCRP04035 FP700111.2-201ENST00000619190 1892 ntBASIC21.97■■□□□ 1.11
HMGCRP04035 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCRP04035 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCRP04035 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.97■■□□□ 1.11
HMGCRP04035 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.97■■□□□ 1.11
HMGCRP04035 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCRP04035 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.97■■□□□ 1.11
HMGCRP04035 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.97■■□□□ 1.11
HMGCRP04035 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCRP04035 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
HMGCRP04035 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.97■■□□□ 1.11
HMGCRP04035 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HMGCRP04035 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCRP04035 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.97■■□□□ 1.11
HMGCRP04035 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HMGCRP04035 KRT8P45-201ENST00000414328 1447 ntBASIC21.97■■□□□ 1.11
HMGCRP04035 KRT8P8-201ENST00000434750 1448 ntBASIC21.97■■□□□ 1.11
HMGCRP04035 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCRP04035 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms