Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNA1P02708 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.22■□□□□ 0.99
CHRNA1P02708 AC009237.14-201ENST00000609975 1594 ntBASIC21.22■□□□□ 0.99
CHRNA1P02708 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.22■□□□□ 0.99
CHRNA1P02708 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRNA1P02708 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHRNA1P02708 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHRNA1P02708 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHRNA1P02708 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHRNA1P02708 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.21■□□□□ 0.99
CHRNA1P02708 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 TSPY5P-201ENST00000426936 936 ntBASIC21.21■□□□□ 0.99
CHRNA1P02708 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.21■□□□□ 0.99
CHRNA1P02708 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHRNA1P02708 COX11P1-201ENST00000489116 835 ntBASIC21.21■□□□□ 0.99
CHRNA1P02708 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 CKBP1-201ENST00000565489 1086 ntBASIC21.21■□□□□ 0.99
CHRNA1P02708 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CHRNA1P02708 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHRNA1P02708 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.21■□□□□ 0.99
CHRNA1P02708 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.21■□□□□ 0.99
CHRNA1P02708 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.21■□□□□ 0.99
CHRNA1P02708 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.21■□□□□ 0.99
CHRNA1P02708 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRNA1P02708 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CHRNA1P02708 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CHRNA1P02708 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CHRNA1P02708 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRNA1P02708 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.2■□□□□ 0.98
CHRNA1P02708 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CHRNA1P02708 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.2■□□□□ 0.98
CHRNA1P02708 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.2■□□□□ 0.98
CHRNA1P02708 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRNA1P02708 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CHRNA1P02708 CA15P1-201ENST00000481698 905 ntBASIC21.2■□□□□ 0.98
CHRNA1P02708 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.2■□□□□ 0.98
CHRNA1P02708 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CHRNA1P02708 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.2■□□□□ 0.98
CHRNA1P02708 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.2■□□□□ 0.98
CHRNA1P02708 LINC01238-205ENST00000567549 1107 ntBASIC21.2■□□□□ 0.98
CHRNA1P02708 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.2■□□□□ 0.98
CHRNA1P02708 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRNA1P02708 AC011558.1-201ENST00000623459 338 ntBASIC21.2■□□□□ 0.98
CHRNA1P02708 AL358472.4-201ENST00000633140 710 ntBASIC21.2■□□□□ 0.98
CHRNA1P02708 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.2■□□□□ 0.98
CHRNA1P02708 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRNA1P02708 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRNA1P02708 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRNA1P02708 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRNA1P02708 AL031133.1-201ENST00000406807 723 ntBASIC21.19■□□□□ 0.98
CHRNA1P02708 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.19■□□□□ 0.98
CHRNA1P02708 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.19■□□□□ 0.98
CHRNA1P02708 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.19■□□□□ 0.98
CHRNA1P02708 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRNA1P02708 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRNA1P02708 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRNA1P02708 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
CHRNA1P02708 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CHRNA1P02708 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHRNA1P02708 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.19■□□□□ 0.98
CHRNA1P02708 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.19■□□□□ 0.98
CHRNA1P02708 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRNA1P02708 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
CHRNA1P02708 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRNA1P02708 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CHRNA1P02708 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA1P02708 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.18■□□□□ 0.98
CHRNA1P02708 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA1P02708 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.18■□□□□ 0.98
CHRNA1P02708 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA1P02708 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRNA1P02708 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CHRNA1P02708 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CHRNA1P02708 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA1P02708 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRNA1P02708 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRNA1P02708 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRNA1P02708 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.18■□□□□ 0.98
CHRNA1P02708 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA1P02708 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA1P02708 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRNA1P02708 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CHRNA1P02708 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.18■□□□□ 0.98
CHRNA1P02708 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms