Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DRAP01903 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DRAP01903 AC093484.2-201ENST00000580996 2166 ntBASIC20.95■□□□□ 0.94
HLA-DRAP01903 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-DRAP01903 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.94■□□□□ 0.94
HLA-DRAP01903 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 AC116562.4-201ENST00000641316 2276 ntBASIC20.93■□□□□ 0.94
HLA-DRAP01903 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 ZNF815P-204ENST00000434898 1737 ntBASIC20.93■□□□□ 0.94
HLA-DRAP01903 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 AC007952.6-201ENST00000573168 2673 ntBASIC20.93■□□□□ 0.94
HLA-DRAP01903 AC003957.1-201ENST00000625108 2673 ntBASIC20.93■□□□□ 0.94
HLA-DRAP01903 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HLA-DRAP01903 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DRAP01903 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.92■□□□□ 0.94
HLA-DRAP01903 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DRAP01903 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DRAP01903 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DRAP01903 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms