Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC063952.2-201ENST00000498792 1227 ntBASIC30.44■■■□□ 2.46
PCF11O94913 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC30.44■■■□□ 2.46
PCF11O94913 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC30.44■■■□□ 2.46
PCF11O94913 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC30.44■■■□□ 2.46
PCF11O94913 AC010653.2-201ENST00000623505 997 ntBASIC30.44■■■□□ 2.46
PCF11O94913 AL358472.4-201ENST00000633140 710 ntBASIC30.44■■■□□ 2.46
PCF11O94913 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC30.44■■■□□ 2.46
PCF11O94913 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC30.44■■■□□ 2.46
PCF11O94913 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC30.44■■■□□ 2.46
PCF11O94913 KRT8P11-201ENST00000409686 1436 ntBASIC30.44■■■□□ 2.46
PCF11O94913 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
PCF11O94913 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCF11O94913 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCF11O94913 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PCF11O94913 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
PCF11O94913 LIN28AP1-201ENST00000429574 405 ntBASIC30.43■■■□□ 2.46
PCF11O94913 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC30.43■■■□□ 2.46
PCF11O94913 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC30.43■■■□□ 2.46
PCF11O94913 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCF11O94913 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC30.43■■■□□ 2.46
PCF11O94913 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCF11O94913 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC30.42■■■□□ 2.46
PCF11O94913 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCF11O94913 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
PCF11O94913 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCF11O94913 GXYLT1P6-201ENST00000456472 1187 ntBASIC30.42■■■□□ 2.46
PCF11O94913 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCF11O94913 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCF11O94913 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC30.42■■■□□ 2.46
PCF11O94913 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
PCF11O94913 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCF11O94913 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCF11O94913 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PCF11O94913 ATP5G1P1-201ENST00000448724 379 ntBASIC30.41■■■□□ 2.46
PCF11O94913 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
PCF11O94913 YBX1P2-201ENST00000489612 999 ntBASIC30.41■■■□□ 2.46
PCF11O94913 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PCF11O94913 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCF11O94913 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
PCF11O94913 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC30.41■■■□□ 2.46
PCF11O94913 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC30.41■■■□□ 2.46
PCF11O94913 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
PCF11O94913 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC30.41■■■□□ 2.46
PCF11O94913 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC30.41■■■□□ 2.46
PCF11O94913 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC30.41■■■□□ 2.46
PCF11O94913 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PCF11O94913 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
PCF11O94913 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC30.41■■■□□ 2.46
PCF11O94913 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC30.41■■■□□ 2.46
PCF11O94913 AC091076.1-201ENST00000610741 619 ntBASIC30.41■■■□□ 2.46
PCF11O94913 AC116562.4-202ENST00000641738 218 ntBASIC30.41■■■□□ 2.46
PCF11O94913 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC30.4■■■□□ 2.46
PCF11O94913 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC30.4■■■□□ 2.46
PCF11O94913 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.4■■■□□ 2.46
PCF11O94913 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
PCF11O94913 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.4■■■□□ 2.46
PCF11O94913 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC30.4■■■□□ 2.46
PCF11O94913 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
PCF11O94913 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCF11O94913 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
PCF11O94913 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCF11O94913 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
PCF11O94913 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
PCF11O94913 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PCF11O94913 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCF11O94913 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCF11O94913 AK4P3-201ENST00000418260 669 ntBASIC30.39■■■□□ 2.46
PCF11O94913 CA15P1-201ENST00000481698 905 ntBASIC30.39■■■□□ 2.46
PCF11O94913 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PCF11O94913 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCF11O94913 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCF11O94913 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
PCF11O94913 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
PCF11O94913 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC30.39■■■□□ 2.45
PCF11O94913 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC30.38■■■□□ 2.45
PCF11O94913 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC30.38■■■□□ 2.45
PCF11O94913 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC30.38■■■□□ 2.45
PCF11O94913 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC30.38■■■□□ 2.45
PCF11O94913 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC30.38■■■□□ 2.45
PCF11O94913 AP003041.3-201ENST00000527151 707 ntBASIC30.38■■■□□ 2.45
PCF11O94913 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC30.38■■■□□ 2.45
PCF11O94913 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PCF11O94913 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PCF11O94913 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PCF11O94913 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 ANKRD20A18P-201ENST00000359341 492 ntBASIC30.37■■■□□ 2.45
PCF11O94913 CD70-202ENST00000423145 881 ntTSL 2 BASIC30.37■■■□□ 2.45
PCF11O94913 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms