Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
LTN1O94822 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 AC011558.1-201ENST00000623459 338 ntBASIC25.91■■□□□ 1.74
LTN1O94822 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.91■■□□□ 1.74
LTN1O94822 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC25.91■■□□□ 1.74
LTN1O94822 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.91■■□□□ 1.74
LTN1O94822 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.91■■□□□ 1.74
LTN1O94822 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
LTN1O94822 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.9■■□□□ 1.74
LTN1O94822 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC25.9■■□□□ 1.74
LTN1O94822 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC25.9■■□□□ 1.74
LTN1O94822 PRSS44-201ENST00000515154 1146 ntBASIC25.9■■□□□ 1.74
LTN1O94822 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.9■■□□□ 1.74
LTN1O94822 ETFA-216ENST00000560726 942 ntTSL 3 BASIC25.9■■□□□ 1.74
LTN1O94822 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.9■■□□□ 1.74
LTN1O94822 NT5C-210ENST00000582160 860 ntTSL 2 BASIC25.9■■□□□ 1.74
LTN1O94822 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.9■■□□□ 1.74
LTN1O94822 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC25.9■■□□□ 1.74
LTN1O94822 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.9■■□□□ 1.74
LTN1O94822 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.9■■□□□ 1.74
LTN1O94822 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC25.9■■□□□ 1.74
LTN1O94822 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.9■■□□□ 1.74
LTN1O94822 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LTN1O94822 ILF2-202ENST00000368681 726 ntTSL 2 BASIC25.9■■□□□ 1.74
LTN1O94822 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.9■■□□□ 1.74
LTN1O94822 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
LTN1O94822 KRT8P45-201ENST00000414328 1447 ntBASIC25.89■■□□□ 1.74
LTN1O94822 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.89■■□□□ 1.74
LTN1O94822 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LTN1O94822 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LTN1O94822 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
LTN1O94822 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LTN1O94822 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
LTN1O94822 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
LTN1O94822 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
LTN1O94822 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
LTN1O94822 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.89■■□□□ 1.73
LTN1O94822 AC093458.2-201ENST00000623150 629 ntBASIC25.89■■□□□ 1.73
LTN1O94822 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.89■■□□□ 1.73
LTN1O94822 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
LTN1O94822 TBC1D3P2-202ENST00000577902 1649 ntBASIC25.89■■□□□ 1.73
LTN1O94822 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.89■■□□□ 1.73
LTN1O94822 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
LTN1O94822 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
LTN1O94822 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.88■■□□□ 1.73
LTN1O94822 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LTN1O94822 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.88■■□□□ 1.73
LTN1O94822 SPDYE15P-201ENST00000424157 909 ntBASIC25.88■■□□□ 1.73
LTN1O94822 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.88■■□□□ 1.73
LTN1O94822 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.88■■□□□ 1.73
LTN1O94822 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.88■■□□□ 1.73
LTN1O94822 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.88■■□□□ 1.73
LTN1O94822 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.88■■□□□ 1.73
LTN1O94822 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.88■■□□□ 1.73
LTN1O94822 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.88■■□□□ 1.73
LTN1O94822 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.88■■□□□ 1.73
LTN1O94822 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LTN1O94822 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LTN1O94822 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.87■■□□□ 1.73
LTN1O94822 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC25.87■■□□□ 1.73
LTN1O94822 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC25.87■■□□□ 1.73
LTN1O94822 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LTN1O94822 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LTN1O94822 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.87■■□□□ 1.73
LTN1O94822 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
LTN1O94822 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC25.87■■□□□ 1.73
LTN1O94822 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
LTN1O94822 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.87■■□□□ 1.73
LTN1O94822 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LTN1O94822 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
LTN1O94822 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
LTN1O94822 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
LTN1O94822 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LTN1O94822 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LTN1O94822 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC25.87■■□□□ 1.73
LTN1O94822 AL512604.3-201ENST00000569583 964 ntBASIC25.87■■□□□ 1.73
LTN1O94822 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.87■■□□□ 1.73
LTN1O94822 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.87■■□□□ 1.73
LTN1O94822 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.87■■□□□ 1.73
LTN1O94822 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
LTN1O94822 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.86■■□□□ 1.73
LTN1O94822 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.86■■□□□ 1.73
LTN1O94822 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms