Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 MMP23A-201ENST00000234610 1017 ntBASIC18.66■□□□□ 0.58
CPNE3O75131 UNC93B2-201ENST00000285383 730 ntBASIC18.66■□□□□ 0.58
CPNE3O75131 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE3O75131 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE3O75131 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.66■□□□□ 0.58
CPNE3O75131 REXO1L10P-201ENST00000615707 1290 ntBASIC18.66■□□□□ 0.58
CPNE3O75131 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.66■□□□□ 0.58
CPNE3O75131 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE3O75131 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CPNE3O75131 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CPNE3O75131 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
CPNE3O75131 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
CPNE3O75131 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE3O75131 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CPNE3O75131 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE3O75131 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CPNE3O75131 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.65■□□□□ 0.58
CPNE3O75131 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE3O75131 RBM17P1-201ENST00000453646 1190 ntBASIC18.65■□□□□ 0.58
CPNE3O75131 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CPNE3O75131 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE3O75131 AC097493.4-201ENST00000641197 219 ntBASIC18.65■□□□□ 0.58
CPNE3O75131 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CPNE3O75131 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 SMG8-203ENST00000578922 2178 ntBASIC18.65■□□□□ 0.58
CPNE3O75131 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE3O75131 AC087289.5-201ENST00000586076 3175 ntBASIC18.65■□□□□ 0.58
CPNE3O75131 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPNE3O75131 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.64■□□□□ 0.58
CPNE3O75131 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
CPNE3O75131 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE3O75131 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE3O75131 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.64■□□□□ 0.57
CPNE3O75131 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE3O75131 TUBB8P6-201ENST00000436895 1288 ntBASIC18.64■□□□□ 0.57
CPNE3O75131 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE3O75131 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE3O75131 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE3O75131 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE3O75131 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 FEM1AP1-201ENST00000431297 1995 ntBASIC18.64■□□□□ 0.57
CPNE3O75131 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE3O75131 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE3O75131 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CPNE3O75131 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.63■□□□□ 0.57
CPNE3O75131 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE3O75131 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE3O75131 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 KRT18P16-201ENST00000510337 1294 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms