Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 SDHAP1-207ENST00000440850 2000 ntBASIC18.74■□□□□ 0.59
PRAMEF4O60810 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF4O60810 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF4O60810 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 CD99P1-205ENST00000527459 561 ntBASIC18.73■□□□□ 0.59
PRAMEF4O60810 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF4O60810 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF4O60810 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF4O60810 KRT17P3-201ENST00000420566 1262 ntBASIC18.72■□□□□ 0.59
PRAMEF4O60810 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF4O60810 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.72■□□□□ 0.59
PRAMEF4O60810 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF4O60810 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEF4O60810 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.72■□□□□ 0.59
PRAMEF4O60810 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEF4O60810 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEF4O60810 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.72■□□□□ 0.59
PRAMEF4O60810 NBPF21P-201ENST00000425093 1451 ntBASIC18.71■□□□□ 0.59
PRAMEF4O60810 AP000974.1-201ENST00000623909 2387 ntBASIC18.71■□□□□ 0.59
PRAMEF4O60810 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 TUBB8P6-201ENST00000436895 1288 ntBASIC18.71■□□□□ 0.59
PRAMEF4O60810 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 AL023875.1-201ENST00000640777 796 ntBASIC18.71■□□□□ 0.59
PRAMEF4O60810 AC073648.6-201ENST00000641589 218 ntBASIC18.71■□□□□ 0.59
PRAMEF4O60810 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms