Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.33■□□□□ 0.52
PLOD3O60568 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
PLOD3O60568 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.33■□□□□ 0.52
PLOD3O60568 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.33■□□□□ 0.52
PLOD3O60568 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.33■□□□□ 0.52
PLOD3O60568 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PLOD3O60568 AL158211.5-201ENST00000623583 2518 ntBASIC18.33■□□□□ 0.52
PLOD3O60568 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PLOD3O60568 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.33■□□□□ 0.52
PLOD3O60568 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PLOD3O60568 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PLOD3O60568 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PLOD3O60568 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PLOD3O60568 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PLOD3O60568 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PLOD3O60568 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.32■□□□□ 0.52
PLOD3O60568 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.32■□□□□ 0.52
PLOD3O60568 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.32■□□□□ 0.52
PLOD3O60568 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.32■□□□□ 0.52
PLOD3O60568 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.32■□□□□ 0.52
PLOD3O60568 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.32■□□□□ 0.52
PLOD3O60568 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.32■□□□□ 0.52
PLOD3O60568 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.32■□□□□ 0.52
PLOD3O60568 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PLOD3O60568 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PLOD3O60568 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PLOD3O60568 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PLOD3O60568 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PLOD3O60568 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PLOD3O60568 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.31■□□□□ 0.52
PLOD3O60568 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PLOD3O60568 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.31■□□□□ 0.52
PLOD3O60568 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.31■□□□□ 0.52
PLOD3O60568 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 AP006587.1-201ENST00000534129 1502 ntBASIC18.31■□□□□ 0.52
PLOD3O60568 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.31■□□□□ 0.52
PLOD3O60568 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.31■□□□□ 0.52
PLOD3O60568 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PLOD3O60568 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PLOD3O60568 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PLOD3O60568 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.3■□□□□ 0.52
PLOD3O60568 KRT17P3-201ENST00000420566 1262 ntBASIC18.3■□□□□ 0.52
PLOD3O60568 YBX1P10-201ENST00000444752 975 ntBASIC18.3■□□□□ 0.52
PLOD3O60568 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PLOD3O60568 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PLOD3O60568 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.3■□□□□ 0.52
PLOD3O60568 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.3■□□□□ 0.52
PLOD3O60568 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.3■□□□□ 0.52
PLOD3O60568 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PLOD3O60568 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PLOD3O60568 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.3■□□□□ 0.52
PLOD3O60568 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PLOD3O60568 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PLOD3O60568 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PLOD3O60568 AIRN-201ENST00000601203 4374 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms