Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF13O43567 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF13O43567 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF13O43567 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF13O43567 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RNF13O43567 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF13O43567 AC090192.1-201ENST00000517740 490 ntBASIC17.71■□□□□ 0.43
RNF13O43567 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF13O43567 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF13O43567 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF13O43567 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF13O43567 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RNF13O43567 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF13O43567 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF13O43567 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF13O43567 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
RNF13O43567 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF13O43567 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF13O43567 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF13O43567 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF13O43567 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF13O43567 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF13O43567 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF13O43567 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF13O43567 AL138781.1-201ENST00000566567 1274 ntBASIC17.7■□□□□ 0.42
RNF13O43567 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RNF13O43567 AC006557.6-201ENST00000623071 864 ntBASIC17.7■□□□□ 0.42
RNF13O43567 AC093503.3-201ENST00000624917 2352 ntBASIC17.7■□□□□ 0.42
RNF13O43567 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF13O43567 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF13O43567 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF13O43567 AC018553.1-201ENST00000616682 1458 ntBASIC17.69■□□□□ 0.42
RNF13O43567 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF13O43567 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF13O43567 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF13O43567 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF13O43567 AC120498.9-201ENST00000339021 3867 ntBASIC17.69■□□□□ 0.42
RNF13O43567 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 AC092368.3-202ENST00000574180 1591 ntBASIC17.69■□□□□ 0.42
RNF13O43567 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
RNF13O43567 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF13O43567 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF13O43567 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF13O43567 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF13O43567 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
RNF13O43567 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF13O43567 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RNF13O43567 AC073210.2-201ENST00000430369 194 ntBASIC17.68■□□□□ 0.42
RNF13O43567 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF13O43567 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF13O43567 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF13O43567 MYC-209ENST00000641252 345 ntBASIC17.68■□□□□ 0.42
RNF13O43567 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF13O43567 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms