Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PROM1O43490 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PROM1O43490 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PROM1O43490 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PROM1O43490 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PROM1O43490 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PROM1O43490 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
PROM1O43490 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PROM1O43490 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.47■□□□□ 0.55
PROM1O43490 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PROM1O43490 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.47■□□□□ 0.55
PROM1O43490 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 AC128676.1-201ENST00000454392 318 ntBASIC18.47■□□□□ 0.55
PROM1O43490 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.47■□□□□ 0.55
PROM1O43490 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.47■□□□□ 0.55
PROM1O43490 KRT18P16-201ENST00000510337 1294 ntBASIC18.47■□□□□ 0.55
PROM1O43490 RN7SL471P-201ENST00000580476 299 ntBASIC18.47■□□□□ 0.55
PROM1O43490 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PROM1O43490 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PROM1O43490 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PROM1O43490 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PROM1O43490 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PROM1O43490 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.46■□□□□ 0.55
PROM1O43490 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PROM1O43490 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.46■□□□□ 0.55
PROM1O43490 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.46■□□□□ 0.55
PROM1O43490 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.46■□□□□ 0.55
PROM1O43490 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.46■□□□□ 0.55
PROM1O43490 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PROM1O43490 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PROM1O43490 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.46■□□□□ 0.55
PROM1O43490 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PROM1O43490 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PROM1O43490 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.46■□□□□ 0.55
PROM1O43490 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PROM1O43490 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
PROM1O43490 NBPF21P-201ENST00000425093 1451 ntBASIC18.46■□□□□ 0.54
PROM1O43490 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.46■□□□□ 0.54
PROM1O43490 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PROM1O43490 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.45■□□□□ 0.54
PROM1O43490 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.45■□□□□ 0.54
PROM1O43490 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.45■□□□□ 0.54
PROM1O43490 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PROM1O43490 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.45■□□□□ 0.54
PROM1O43490 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.45■□□□□ 0.54
PROM1O43490 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PROM1O43490 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.45■□□□□ 0.54
PROM1O43490 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.45■□□□□ 0.54
PROM1O43490 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.45■□□□□ 0.54
PROM1O43490 AL023875.1-201ENST00000640777 796 ntBASIC18.45■□□□□ 0.54
PROM1O43490 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
PROM1O43490 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PROM1O43490 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 KRT8P8-201ENST00000434750 1448 ntBASIC18.44■□□□□ 0.54
PROM1O43490 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.44■□□□□ 0.54
PROM1O43490 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms