Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HTRA2O43464 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.67■□□□□ 0.74
HTRA2O43464 AC012618.2-201ENST00000428058 849 ntBASIC19.67■□□□□ 0.74
HTRA2O43464 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.67■□□□□ 0.74
HTRA2O43464 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.67■□□□□ 0.74
HTRA2O43464 AC233702.5-201ENST00000584107 538 ntBASIC19.67■□□□□ 0.74
HTRA2O43464 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.67■□□□□ 0.74
HTRA2O43464 Z99916.2-201ENST00000604037 246 ntBASIC19.67■□□□□ 0.74
HTRA2O43464 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.67■□□□□ 0.74
HTRA2O43464 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.67■□□□□ 0.74
HTRA2O43464 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.67■□□□□ 0.74
HTRA2O43464 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HTRA2O43464 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 RPS2P55-201ENST00000397318 883 ntBASIC19.66■□□□□ 0.74
HTRA2O43464 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HTRA2O43464 AL353807.1-201ENST00000427475 662 ntBASIC19.66■□□□□ 0.74
HTRA2O43464 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.66■□□□□ 0.74
HTRA2O43464 AC107956.1-201ENST00000494359 873 ntBASIC19.66■□□□□ 0.74
HTRA2O43464 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.66■□□□□ 0.74
HTRA2O43464 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.66■□□□□ 0.74
HTRA2O43464 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HTRA2O43464 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.66■□□□□ 0.74
HTRA2O43464 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.66■□□□□ 0.74
HTRA2O43464 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTRA2O43464 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.66■□□□□ 0.74
HTRA2O43464 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HTRA2O43464 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.65■□□□□ 0.74
HTRA2O43464 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.65■□□□□ 0.74
HTRA2O43464 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.65■□□□□ 0.74
HTRA2O43464 AF186192.3-201ENST00000583427 947 ntBASIC19.65■□□□□ 0.74
HTRA2O43464 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.65■□□□□ 0.74
HTRA2O43464 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HTRA2O43464 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.65■□□□□ 0.74
HTRA2O43464 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.65■□□□□ 0.74
HTRA2O43464 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.65■□□□□ 0.74
HTRA2O43464 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HTRA2O43464 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTRA2O43464 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTRA2O43464 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTRA2O43464 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HTRA2O43464 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTRA2O43464 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTRA2O43464 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.64■□□□□ 0.73
HTRA2O43464 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.64■□□□□ 0.73
HTRA2O43464 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.64■□□□□ 0.73
HTRA2O43464 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.64■□□□□ 0.73
HTRA2O43464 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.64■□□□□ 0.73
HTRA2O43464 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HTRA2O43464 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HTRA2O43464 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HTRA2O43464 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
HTRA2O43464 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HTRA2O43464 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HTRA2O43464 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTRA2O43464 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.63■□□□□ 0.73
HTRA2O43464 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.63■□□□□ 0.73
HTRA2O43464 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.63■□□□□ 0.73
HTRA2O43464 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
HTRA2O43464 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HTRA2O43464 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTRA2O43464 MIR718-201ENST00000390190 70 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms