Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PAX4O43316 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.9□□□□□ -0.18
PAX4O43316 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PAX4O43316 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
PAX4O43316 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.9□□□□□ -0.18
PAX4O43316 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PAX4O43316 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.9□□□□□ -0.18
PAX4O43316 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PAX4O43316 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.9□□□□□ -0.18
PAX4O43316 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PAX4O43316 AC120498.8-201ENST00000614275 531 ntBASIC13.9□□□□□ -0.18
PAX4O43316 AL121906.2-201ENST00000621597 723 ntBASIC13.9□□□□□ -0.18
PAX4O43316 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.9□□□□□ -0.18
PAX4O43316 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PAX4O43316 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.9□□□□□ -0.18
PAX4O43316 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
PAX4O43316 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.9□□□□□ -0.18
PAX4O43316 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
PAX4O43316 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.9□□□□□ -0.18
PAX4O43316 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PAX4O43316 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PAX4O43316 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.9□□□□□ -0.19
PAX4O43316 NFIC-211ENST00000641145 8399 ntBASIC13.89□□□□□ -0.19
PAX4O43316 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
PAX4O43316 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX4O43316 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX4O43316 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 CD99P1-205ENST00000527459 561 ntBASIC13.89□□□□□ -0.19
PAX4O43316 AP003097.1-201ENST00000530657 1135 ntBASIC13.89□□□□□ -0.19
PAX4O43316 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PAX4O43316 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.89□□□□□ -0.19
PAX4O43316 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.89□□□□□ -0.19
PAX4O43316 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PAX4O43316 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.89□□□□□ -0.19
PAX4O43316 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PAX4O43316 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.88□□□□□ -0.19
PAX4O43316 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 AC018553.1-201ENST00000616682 1458 ntBASIC13.88□□□□□ -0.19
PAX4O43316 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX4O43316 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.88□□□□□ -0.19
PAX4O43316 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.88□□□□□ -0.19
PAX4O43316 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX4O43316 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PAX4O43316 KRT17P3-201ENST00000420566 1262 ntBASIC13.88□□□□□ -0.19
PAX4O43316 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX4O43316 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.88□□□□□ -0.19
PAX4O43316 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX4O43316 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
PAX4O43316 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.88□□□□□ -0.19
PAX4O43316 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.88□□□□□ -0.19
PAX4O43316 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
PAX4O43316 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PAX4O43316 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.88□□□□□ -0.19
PAX4O43316 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PAX4O43316 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.88□□□□□ -0.19
PAX4O43316 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms