Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.57■□□□□ 0.56
RTCAO00442 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.57■□□□□ 0.56
RTCAO00442 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.57■□□□□ 0.56
RTCAO00442 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RTCAO00442 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 NBPF21P-201ENST00000425093 1451 ntBASIC18.57■□□□□ 0.56
RTCAO00442 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RTCAO00442 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTCAO00442 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RTCAO00442 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.56■□□□□ 0.56
RTCAO00442 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.56■□□□□ 0.56
RTCAO00442 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.56■□□□□ 0.56
RTCAO00442 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
RTCAO00442 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.56■□□□□ 0.56
RTCAO00442 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RTCAO00442 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RTCAO00442 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTCAO00442 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RTCAO00442 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.55■□□□□ 0.56
RTCAO00442 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RTCAO00442 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.55■□□□□ 0.56
RTCAO00442 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTCAO00442 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RTCAO00442 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RTCAO00442 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.55■□□□□ 0.56
RTCAO00442 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RTCAO00442 KRASP1-201ENST00000407852 552 ntBASIC18.55■□□□□ 0.56
RTCAO00442 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.55■□□□□ 0.56
RTCAO00442 FAM201B-201ENST00000458407 597 ntBASIC18.55■□□□□ 0.56
RTCAO00442 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.55■□□□□ 0.56
RTCAO00442 KRT18P16-201ENST00000510337 1294 ntBASIC18.55■□□□□ 0.56
RTCAO00442 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.55■□□□□ 0.56
RTCAO00442 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTCAO00442 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTCAO00442 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.55■□□□□ 0.56
RTCAO00442 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.55■□□□□ 0.56
RTCAO00442 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RTCAO00442 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.54■□□□□ 0.56
RTCAO00442 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RTCAO00442 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.54■□□□□ 0.56
RTCAO00442 AC239809.2-201ENST00000415381 517 ntBASIC18.54■□□□□ 0.56
RTCAO00442 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.54■□□□□ 0.56
RTCAO00442 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.54■□□□□ 0.56
RTCAO00442 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.54■□□□□ 0.56
RTCAO00442 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RTCAO00442 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 RN7SL471P-201ENST00000580476 299 ntBASIC18.54■□□□□ 0.56
RTCAO00442 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.54■□□□□ 0.56
RTCAO00442 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RTCAO00442 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
RTCAO00442 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 AC005332.7-201ENST00000614046 2005 ntBASIC18.54■□□□□ 0.56
RTCAO00442 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTCAO00442 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.53■□□□□ 0.56
RTCAO00442 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTCAO00442 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms