Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CACNB4O00305 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CACNB4O00305 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CACNB4O00305 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNB4O00305 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CACNB4O00305 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CACNB4O00305 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNB4O00305 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNB4O00305 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNB4O00305 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNB4O00305 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CACNB4O00305 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNB4O00305 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
CACNB4O00305 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.23■□□□□ 0.67
CACNB4O00305 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 AC079598.2-202ENST00000546624 1451 ntBASIC19.23■□□□□ 0.67
CACNB4O00305 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 MIR1238-201ENST00000408483 83 ntBASIC19.23■□□□□ 0.67
CACNB4O00305 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.23■□□□□ 0.67
CACNB4O00305 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.23■□□□□ 0.67
CACNB4O00305 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.23■□□□□ 0.67
CACNB4O00305 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.23■□□□□ 0.67
CACNB4O00305 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.23■□□□□ 0.67
CACNB4O00305 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CACNB4O00305 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNB4O00305 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CACNB4O00305 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNB4O00305 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNB4O00305 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNB4O00305 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNB4O00305 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNB4O00305 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNB4O00305 B3GAT3P1-201ENST00000471720 806 ntBASIC19.22■□□□□ 0.67
CACNB4O00305 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CACNB4O00305 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNB4O00305 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.22■□□□□ 0.67
CACNB4O00305 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CACNB4O00305 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNB4O00305 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNB4O00305 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CACNB4O00305 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CACNB4O00305 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.21■□□□□ 0.67
CACNB4O00305 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNB4O00305 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.21■□□□□ 0.67
CACNB4O00305 DGCR10-201ENST00000609839 495 ntBASIC19.21■□□□□ 0.67
CACNB4O00305 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CACNB4O00305 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CACNB4O00305 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms