Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX39AO00148 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX39AO00148 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
DDX39AO00148 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
DDX39AO00148 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX39AO00148 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.93■■□□□ 1.1
DDX39AO00148 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX39AO00148 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX39AO00148 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX39AO00148 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX39AO00148 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DDX39AO00148 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
DDX39AO00148 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX39AO00148 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 AC004980.1-204ENST00000429707 299 ntBASIC21.92■■□□□ 1.1
DDX39AO00148 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
DDX39AO00148 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX39AO00148 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX39AO00148 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
DDX39AO00148 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX39AO00148 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDX39AO00148 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDX39AO00148 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.91■■□□□ 1.1
DDX39AO00148 RBM17P1-201ENST00000453646 1190 ntBASIC21.91■■□□□ 1.1
DDX39AO00148 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.91■■□□□ 1.1
DDX39AO00148 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.91■■□□□ 1.1
DDX39AO00148 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 AP000525.1-201ENST00000608286 694 ntBASIC21.91■■□□□ 1.1
DDX39AO00148 AL031985.4-201ENST00000642138 673 ntBASIC21.91■■□□□ 1.1
DDX39AO00148 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
DDX39AO00148 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX39AO00148 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX39AO00148 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX39AO00148 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX39AO00148 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DDX39AO00148 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX39AO00148 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX39AO00148 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX39AO00148 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
DDX39AO00148 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX39AO00148 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX39AO00148 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.9■■□□□ 1.1
DDX39AO00148 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX39AO00148 AC079598.2-202ENST00000546624 1451 ntBASIC21.9■■□□□ 1.1
DDX39AO00148 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
DDX39AO00148 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
DDX39AO00148 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
DDX39AO00148 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
DDX39AO00148 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX39AO00148 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
DDX39AO00148 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
DDX39AO00148 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.89■■□□□ 1.09
DDX39AO00148 ECEL1P3-201ENST00000427961 737 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms