Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC093787.1-201ENST00000450396 207 ntBASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 AC231657.2-201ENST00000624556 255 ntBASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 BID-214ENST00000617586 542 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49D1C9J1S8 AC141586.3-201ENST00000562166 1838 ntBASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 AC006333.2-201ENST00000607957 2099 ntBASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM49D1C9J1S8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49D1C9J1S8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms