Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
YJEFN3A6XGL0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
YJEFN3A6XGL0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
YJEFN3A6XGL0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YJEFN3A6XGL0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 LINC01465-201ENST00000408887 1940 ntBASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YJEFN3A6XGL0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 KRT16P1-201ENST00000399124 1418 ntBASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
YJEFN3A6XGL0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.33■□□□□ 0.85
YJEFN3A6XGL0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
YJEFN3A6XGL0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.84
YJEFN3A6XGL0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
YJEFN3A6XGL0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
YJEFN3A6XGL0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
YJEFN3A6XGL0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
YJEFN3A6XGL0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
YJEFN3A6XGL0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YJEFN3A6XGL0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 AC004980.1-204ENST00000429707 299 ntBASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
YJEFN3A6XGL0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.3■□□□□ 0.84
YJEFN3A6XGL0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms