Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 AC011676.5-201ENST00000624864 2660 ntBASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.29■□□□□ 0.04
PCP4L1A6NKN8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 LINC02228-204ENST00000642115 2962 ntBASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCP4L1A6NKN8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 LINC01465-201ENST00000408887 1940 ntBASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 CROCCP3-202ENST00000420820 1947 ntBASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCP4L1A6NKN8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCP4L1A6NKN8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms