Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV3S1A0A5B6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 AL591742.1-201ENST00000604433 565 ntBASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV3S1A0A5B6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 ZNF815P-204ENST00000434898 1737 ntBASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV3S1A0A5B6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms