Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 LTB4R2-202ENST00000528054 3092 ntBASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 AC096631.2-201ENST00000436136 790 ntBASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 AP000997.3-201ENST00000623333 2250 ntBASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRDV1A0A1B0GX56 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
TRDV1A0A1B0GX56 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 LINC02228-203ENST00000641970 1355 ntBASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 AL512353.2-201ENST00000448759 1962 ntBASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRDV1A0A1B0GX56 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms