Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV4A0A0B4J268 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TRAV4A0A0B4J268 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV4A0A0B4J268 LTB4R2-202ENST00000528054 3092 ntBASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 AC092666.2-201ENST00000613287 246 ntBASIC14.01□□□□□ -0.17
TRAV4A0A0B4J268 HLA-B-256ENST00000639848 1089 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms