Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 ABALON-201ENST00000629058 1903 ntBASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 UNC93B8-201ENST00000511903 705 ntBASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV12-1A0A0B4J245 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV12-1A0A0B4J245 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 PGM5P4-201ENST00000421970 445 ntBASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 AC007322.3-201ENST00000426526 701 ntBASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 IGHV3-19-201ENST00000521488 291 ntBASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 AC105233.4-201ENST00000642045 216 ntBASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 TEX21P-204ENST00000641479 1693 ntBASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 FP475955.4-201ENST00000623131 1990 ntBASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV12-1A0A0B4J245 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms