Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 SMG8-203ENST00000578922 2178 ntBASIC18.47■□□□□ 0.55
CCDC187A0A096LP49 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 KRT18P56-201ENST00000507275 550 ntBASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 AC140113.3-201ENST00000605663 199 ntBASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC187A0A096LP49 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.46■□□□□ 0.54
CCDC187A0A096LP49 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 PCED1CP-201ENST00000419887 785 ntBASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 AC009947.2-201ENST00000444014 672 ntBASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 AP001271.2-201ENST00000624018 1556 ntBASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC187A0A096LP49 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 BX119927.1-201ENST00000636596 1552 ntBASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 AL137060.1-201ENST00000618151 2648 ntBASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC187A0A096LP49 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms