Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 RNU5A-6P-201ENST00000384136 116 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AP000357.1-201ENST00000409926 1165 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 RNU6-575P-201ENST00000411326 105 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AL096829.1-201ENST00000413677 457 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC012498.1-201ENST00000424037 437 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC128677.1-201ENST00000436016 442 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 OR3D1P-201ENST00000438288 955 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 ARMC4P1-201ENST00000438905 707 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC234771.4-201ENST00000441416 730 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 CALM1P2-201ENST00000452941 448 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 TREML3P-201ENST00000457327 501 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 UBDP1-202ENST00000457888 382 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC015524.1-201ENST00000491585 472 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AL358832.1-201ENST00000497800 389 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 RNU6-507P-201ENST00000516045 100 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 RNA5SP75-201ENST00000516841 111 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC078899.1-201ENST00000521432 1185 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 CYCSP25-201ENST00000525280 316 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC006115.2-201ENST00000596823 202 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 C8orf59P2-201ENST00000603441 271 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC005034.5-201ENST00000604219 466 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AL078624.2-201ENST00000605063 554 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC126177.8-201ENST00000618339 1015 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 AC007342.8-201ENST00000623278 678 ntBASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CAPN6Q9Y6Q1 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AL355488.2-201ENST00000609909 2850 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 MTND5P17-201ENST00000418405 1603 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 RNU6-660P-201ENST00000364566 109 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 RNA5SP211-201ENST00000365516 117 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 XGY1-201ENST00000381172 446 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 RNU4-31P-201ENST00000384211 141 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 Y_RNA.582-201ENST00000391023 95 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 ARSFP1-201ENST00000398758 477 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 FGF7P8-201ENST00000402994 292 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 MIR1277-201ENST00000408536 78 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 RN7SKP56-201ENST00000410513 331 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 PIGPP2-201ENST00000411569 458 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 RPL21P32-201ENST00000419877 477 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 MTCO1P54-201ENST00000430139 712 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 MTCO2P11-201ENST00000431069 680 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 VN1R10P-201ENST00000447106 875 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 Z83838.1-202ENST00000456225 839 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 KLF3P2-201ENST00000465138 268 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AC079841.1-201ENST00000481228 950 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 RPL9P6-201ENST00000492764 598 ntBASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.33□□□□□ -1.4
CAPN6Q9Y6Q1 AC122718.2-201ENST00000505325 591 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms