Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RNU6-985P-201ENST00000410182 104 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 Y_RNA.608-201ENST00000410647 95 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RPL12P16-201ENST00000431098 498 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AL627308.1-201ENST00000435693 821 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AL121578.2-201ENST00000448797 447 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 YWHAEP1-201ENST00000453697 763 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RNU7-152P-201ENST00000458982 64 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RPL34P34-201ENST00000465389 354 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RPL17P2-201ENST00000491913 451 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 CDH12P2-201ENST00000504393 298 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 FTH1P9-201ENST00000513251 355 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RN7SKP11-201ENST00000517018 287 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RNU2-46P-201ENST00000517038 113 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AC068790.5-201ENST00000602741 355 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AC008782.1-201ENST00000603386 430 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AC103710.4-201ENST00000609301 899 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 AP003119.3-201ENST00000566747 4192 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RBPJP7-201ENST00000442803 1447 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 RBPJP5-201ENST00000449433 1447 ntBASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
HPS5Q9UPZ3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC117470.1-201ENST00000381974 330 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 RNU1-39P-201ENST00000383897 165 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AL161909.1-201ENST00000397390 712 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 RPL34P3-201ENST00000421454 338 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 RPL31P35-201ENST00000431058 377 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC007679.3-201ENST00000434035 414 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AL157827.1-201ENST00000447622 132 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 TCEA1P1-201ENST00000449716 880 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 MTCO3P10-201ENST00000455912 772 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 BX323845.2-201ENST00000458382 234 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 RPS27AP17-201ENST00000463344 455 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 RPS3AP50-201ENST00000487064 803 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 RNU6-445P-201ENST00000516949 107 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC051619.2-201ENST00000559063 397 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC011497.2-201ENST00000600255 639 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC109309.2-201ENST00000612597 332 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC091544.5-201ENST00000620192 3815 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC027559.1-201ENST00000636288 271 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 EFTUD1P2-201ENST00000514817 1603 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 AC092111.1-201ENST00000618256 3358 ntBASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HPS5Q9UPZ3 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms