Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 CASC19-221ENST00000641309 1382 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SNORD50.1-201ENST00000362987 71 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RNU6-259P-201ENST00000383999 107 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RNU6-306P-201ENST00000384617 107 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ATP5F1P6-201ENST00000402768 767 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RPS17P8-201ENST00000434525 335 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AL136097.1-201ENST00000456945 913 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 HMGN1P9-201ENST00000515212 298 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RNU6-314P-201ENST00000516574 104 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC109635.4-202ENST00000531666 412 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC009063.1-201ENST00000563342 702 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC091042.1-201ENST00000579213 173 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 KPNA2P3-201ENST00000584190 848 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AP000676.3-201ENST00000623299 569 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC132825.7-201ENST00000638744 335 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RNA5SP335-201ENST00000363817 110 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SNORA19-201ENST00000384737 128 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RNU6-1300P-201ENST00000391046 108 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 RNA5SP332-201ENST00000391063 115 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 ZNF863P-201ENST00000426746 417 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AL136231.1-201ENST00000429407 730 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC004069.2-201ENST00000505438 1114 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC093770.1-201ENST00000511559 571 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC026616.1-201ENST00000523157 525 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 SCARNA9-201ENST00000530422 353 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 OR5B10P-201ENST00000532869 642 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC090616.5-202ENST00000582111 297 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC021749.1-201ENST00000604322 607 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC009159.2-201ENST00000617603 606 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC092140.2-201ENST00000618027 521 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 AC068722.2-201ENST00000618734 544 ntBASIC1.81□□□□□ -2.12
HMCN1Q96RW7 MRPL57P1-201ENST00000621486 265 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms