Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AL031595.2-201ENST00000624215 19071 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 Y_RNA.553-201ENST00000384670 102 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC019050.1-201ENST00000418508 492 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 RPL7AP51-201ENST00000422016 760 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 RPL7P44-201ENST00000424827 742 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 VN1R20P-201ENST00000425215 966 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AL663074.2-201ENST00000440621 479 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC023271.1-201ENST00000445936 1090 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC097359.1-201ENST00000447946 463 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 FAR2P1-206ENST00000449736 709 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SDC4P-201ENST00000453285 601 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SETP11-201ENST00000473027 690 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 HMGN1P16-201ENST00000508308 283 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 RNU6-416P-201ENST00000516265 103 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC078899.1-201ENST00000521432 1185 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC011500.1-201ENST00000601963 469 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 WISP1-OT1-201ENST00000602893 642 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC131235.4-201ENST00000609288 620 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC004948.1-201ENST00000609858 672 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC015712.7-201ENST00000615211 635 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC244100.4-201ENST00000617747 388 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AL356121.2-201ENST00000624715 780 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC116618.1-201ENST00000634617 774 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 AC005005.4-201ENST00000623789 16698 ntBASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PIK3C3Q8NEB9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 SSXP3-201ENST00000442971 1300 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 OR10R3P-201ENST00000361688 942 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 RN7SKP250-201ENST00000363924 321 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 SNORA62.2-201ENST00000364672 152 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 RNU6-253P-201ENST00000384730 105 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 MIR16-1-201ENST00000385271 89 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 RNA5SP156-201ENST00000410250 110 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 TPT1P2-201ENST00000413105 503 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 RPS15AP38-201ENST00000413110 372 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 AC079809.1-201ENST00000415468 276 ntBASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.53□□□□□ -1.52
PIK3C3Q8NEB9 AL049610.1-201ENST00000423374 372 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms