Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS2P54868 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 PARP4P3-201ENST00000510265 317 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 RNA5SP315-201ENST00000516340 116 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 RNA5SP312-201ENST00000517068 116 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS2P54868 TRAV8-5-201ENST00000537369 341 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGCS2P54868 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS2P54868 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGCS2P54868 AC027216.1-201ENST00000577726 685 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 AL591034.3-201ENST00000605511 685 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 AC090948.2-201ENST00000607363 564 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGCS2P54868 RNA5SP196-201ENST00000625967 102 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 DDX18P6-201ENST00000450119 1997 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 CPHL1P-201ENST00000461341 3407 ntBASIC5.23□□□□□ -1.57
HMGCS2P54868 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGCS2P54868 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS2P54868 EIF2AP4-201ENST00000424793 1781 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS2P54868 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCS2P54868 ATP5F1P2-201ENST00000398143 760 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS2P54868 AC104333.2-201ENST00000422630 192 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 NPM1P26-201ENST00000426339 738 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 RPL34P6-201ENST00000432390 345 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS2P54868 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCS2P54868 AC012123.2-201ENST00000485809 248 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 AC108475.1-201ENST00000507880 950 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 NPM1P5-201ENST00000557228 838 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 AC016839.1-201ENST00000578162 867 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGCS2P54868 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGCS2P54868 AL139254.3-201ENST00000641097 674 ntBASIC5.22□□□□□ -1.57
HMGCS2P54868 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HMGCS2P54868 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HMGCS2P54868 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HMGCS2P54868 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.22□□□□□ -1.57
HMGCS2P54868 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS2P54868 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS2P54868 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGCS2P54868 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGCS2P54868 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
HMGCS2P54868 AC104623.2-202ENST00000623477 4002 ntBASIC5.21□□□□□ -1.57
HMGCS2P54868 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HMGCS2P54868 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HMGCS2P54868 CASC19-255ENST00000641733 1385 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 MIR383-201ENST00000362257 73 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 MIR331-201ENST00000362302 94 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 RNU1-94P-201ENST00000362627 173 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 RN7SKP186-201ENST00000365371 303 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 RNU1-64P-201ENST00000365443 163 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 RNU1-13P-201ENST00000384499 162 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AL139095.3-201ENST00000419672 1203 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AL158073.1-201ENST00000426848 1104 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 RPL5P2-201ENST00000429598 854 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 MTND4LP12-201ENST00000448237 295 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCS2P54868 AC091153.1-201ENST00000466297 402 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 SLC25A15P5-201ENST00000508033 253 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 HMGB1P23-201ENST00000518743 568 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HMGCS2P54868 TRAV11-201ENST00000539512 339 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCS2P54868 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGCS2P54868 AC090515.3-201ENST00000560431 315 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 RNF138P2-201ENST00000603490 592 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AC113403.1-201ENST00000604910 193 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AC079791.1-201ENST00000605356 973 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AC015849.6-201ENST00000605454 474 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGCS2P54868 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGCS2P54868 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGCS2P54868 LINC00622-201ENST00000562811 1570 ntBASIC5.21□□□□□ -1.58
HMGCS2P54868 AC104118.1-201ENST00000607625 1589 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms