Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NUP98P52948 AC068870.3-201ENST00000625077 2536 ntBASIC5.43□□□□□ -1.54
NUP98P52948 OR56B2P-201ENST00000317102 954 ntBASIC5.43□□□□□ -1.54
NUP98P52948 RNU1-83P-201ENST00000363426 164 ntBASIC5.43□□□□□ -1.54
NUP98P52948 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 AL592291.1-201ENST00000403830 352 ntBASIC5.43□□□□□ -1.54
NUP98P52948 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP98P52948 RCC2P2-201ENST00000422174 918 ntBASIC5.43□□□□□ -1.54
NUP98P52948 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP98P52948 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP98P52948 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NUP98P52948 KCTD9P2-201ENST00000512203 1013 ntBASIC5.43□□□□□ -1.54
NUP98P52948 OR5BC1P-201ENST00000529327 739 ntBASIC5.43□□□□□ -1.54
NUP98P52948 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
NUP98P52948 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP98P52948 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP98P52948 COX6CP4-201ENST00000605798 228 ntBASIC5.43□□□□□ -1.54
NUP98P52948 RNU4-89P-201ENST00000607443 133 ntBASIC5.43□□□□□ -1.54
NUP98P52948 MIR3653-201ENST00000625572 110 ntBASIC5.43□□□□□ -1.54
NUP98P52948 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP98P52948 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP98P52948 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NUP98P52948 MT-RNR1-201ENST00000389680 954 ntBASIC5.42□□□□□ -1.54
NUP98P52948 TRGV7-201ENST00000427089 353 ntBASIC5.42□□□□□ -1.54
NUP98P52948 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP98P52948 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP98P52948 AC108751.2-201ENST00000469993 231 ntBASIC5.42□□□□□ -1.54
NUP98P52948 AF213884.1-201ENST00000488102 463 ntBASIC5.42□□□□□ -1.54
NUP98P52948 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.42□□□□□ -1.54
NUP98P52948 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP98P52948 RPL23AP97-201ENST00000568955 471 ntBASIC5.42□□□□□ -1.54
NUP98P52948 AC099676.1-201ENST00000608886 657 ntBASIC5.42□□□□□ -1.54
NUP98P52948 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP98P52948 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NUP98P52948 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP98P52948 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP98P52948 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NUP98P52948 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
NUP98P52948 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP98P52948 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NUP98P52948 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 AMZ2P2-201ENST00000406819 1057 ntBASIC5.41□□□□□ -1.54
NUP98P52948 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 OR2AH1P-201ENST00000425717 928 ntBASIC5.41□□□□□ -1.54
NUP98P52948 GTF3AP5-201ENST00000442645 697 ntBASIC5.41□□□□□ -1.54
NUP98P52948 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 RPS20P4-201ENST00000461659 355 ntBASIC5.41□□□□□ -1.54
NUP98P52948 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP98P52948 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NUP98P52948 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 MRPS21P9-201ENST00000571150 257 ntBASIC5.41□□□□□ -1.54
NUP98P52948 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 AC006133.1-201ENST00000617106 264 ntBASIC5.41□□□□□ -1.54
NUP98P52948 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NUP98P52948 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 AL731532.2-201ENST00000623542 1953 ntBASIC5.41□□□□□ -1.54
NUP98P52948 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP98P52948 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP98P52948 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP98P52948 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP98P52948 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP98P52948 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NUP98P52948 MIR921-201ENST00000401133 56 ntBASIC5.41□□□□□ -1.54
NUP98P52948 AL080315.1-201ENST00000406055 466 ntBASIC5.41□□□□□ -1.54
NUP98P52948 RN7SL542P-201ENST00000467147 294 ntBASIC5.41□□□□□ -1.54
NUP98P52948 CR383656.1-201ENST00000484916 377 ntBASIC5.41□□□□□ -1.54
NUP98P52948 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP98P52948 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP98P52948 ATP1B1P1-201ENST00000509767 915 ntBASIC5.41□□□□□ -1.54
NUP98P52948 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP98P52948 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 AC025175.1-201ENST00000606482 759 ntBASIC5.41□□□□□ -1.54
NUP98P52948 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP98P52948 AP001157.1-201ENST00000550837 2339 ntBASIC5.41□□□□□ -1.54
NUP98P52948 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms