Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.13□□□□□ -1.43
COL15A1P39059 UBE2D3P3-201ENST00000426992 425 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 PTP4A1P3-201ENST00000433661 420 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 CYCSP24-201ENST00000445119 316 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC091868.1-201ENST00000508746 304 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.13□□□□□ -1.43
COL15A1P39059 RNA5SP230-201ENST00000517039 122 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
COL15A1P39059 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.13□□□□□ -1.43
COL15A1P39059 MIR5699-201ENST00000578903 90 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC125494.2-201ENST00000602431 657 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 AC005962.2-201ENST00000611427 652 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC097460.3-201ENST00000623099 442 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL15A1P39059 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL15A1P39059 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.13□□□□□ -1.43
COL15A1P39059 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL15A1P39059 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.13□□□□□ -1.43
COL15A1P39059 AC011447.7-201ENST00000624228 1590 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 AC007382.1-201ENST00000624376 2618 ntBASIC6.13□□□□□ -1.43
COL15A1P39059 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 AC063976.2-201ENST00000425667 3556 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL15A1P39059 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.12□□□□□ -1.43
COL15A1P39059 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.12□□□□□ -1.43
COL15A1P39059 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.12□□□□□ -1.43
COL15A1P39059 MRPL50P1-201ENST00000431951 384 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 XKRY2-201ENST00000442362 1093 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 MRPL35P2-201ENST00000448009 511 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.12□□□□□ -1.43
COL15A1P39059 TVP23BP2-201ENST00000455082 615 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 MTND2P28-201ENST00000457540 1044 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 MYL12BP2-201ENST00000503948 512 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.12□□□□□ -1.43
COL15A1P39059 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.12□□□□□ -1.43
COL15A1P39059 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.12□□□□□ -1.43
COL15A1P39059 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL15A1P39059 MIR4675-201ENST00000577898 77 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 KPNA2P3-201ENST00000584190 848 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 AC133794.1-201ENST00000602731 914 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 AC103792.1-201ENST00000603591 919 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 AL096803.3-201ENST00000609032 532 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.12□□□□□ -1.43
COL15A1P39059 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
COL15A1P39059 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.12□□□□□ -1.43
COL15A1P39059 AC011755.1-201ENST00000623763 2049 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL15A1P39059 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL15A1P39059 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 AC125257.1-201ENST00000560400 2930 ntBASIC6.12□□□□□ -1.43
COL15A1P39059 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL15A1P39059 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL15A1P39059 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL15A1P39059 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.11□□□□□ -1.43
COL15A1P39059 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL15A1P39059 CCT8P1-201ENST00000413611 1657 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.11□□□□□ -1.43
COL15A1P39059 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.11□□□□□ -1.43
COL15A1P39059 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.11□□□□□ -1.43
COL15A1P39059 AC073136.1-201ENST00000449426 2884 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL15A1P39059 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL15A1P39059 AL353692.2-201ENST00000407054 335 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.11□□□□□ -1.43
COL15A1P39059 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.11□□□□□ -1.43
COL15A1P39059 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.11□□□□□ -1.43
COL15A1P39059 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.11□□□□□ -1.43
COL15A1P39059 Y_RNA.719-201ENST00000517156 106 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 HMGB1P46-201ENST00000520062 610 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.11□□□□□ -1.43
COL15A1P39059 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.11□□□□□ -1.43
COL15A1P39059 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.11□□□□□ -1.43
COL15A1P39059 MTND1P8-201ENST00000571424 950 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 MIR4660-201ENST00000583549 74 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL15A1P39059 AL158050.2-201ENST00000605336 568 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 AF129408.1-201ENST00000608767 431 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 AC008147.4-201ENST00000617570 1204 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 AC068724.3-201ENST00000625906 87 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.11□□□□□ -1.43
COL15A1P39059 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.11□□□□□ -1.43
COL15A1P39059 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.11□□□□□ -1.43
COL15A1P39059 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.11□□□□□ -1.43
COL15A1P39059 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL15A1P39059 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL15A1P39059 OR56B2P-202ENST00000641377 2453 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 ZFRP1-201ENST00000457579 2970 ntBASIC6.11□□□□□ -1.43
COL15A1P39059 AC093909.5-201ENST00000621839 1799 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms