Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RNA5SP345-201ENST00000410646 108 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA3P32297 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA3P32297 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA3P32297 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA3P32297 AL360081.1-201ENST00000428299 555 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 AL049745.1-201ENST00000433953 286 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 AL451139.1-201ENST00000434718 346 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 AC097523.2-201ENST00000435551 652 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA3P32297 AC104651.2-201ENST00000447549 528 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 EIF2S2P4-201ENST00000461070 984 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA3P32297 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 NPM1P29-201ENST00000483112 803 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 OR52A4P-203ENST00000498233 1014 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA3P32297 GAPDHP56-201ENST00000506031 988 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 RFPL4AP5-201ENST00000514977 504 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.03□□□□□ -1.6
CHRNA3P32297 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA3P32297 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA3P32297 BGLT3-201ENST00000564523 994 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 MIR4700-201ENST00000578311 74 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA3P32297 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.03□□□□□ -1.6
CHRNA3P32297 AP002967.1-201ENST00000624203 539 ntBASIC5.03□□□□□ -1.6
CHRNA3P32297 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.03□□□□□ -1.6
CHRNA3P32297 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA3P32297 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHRNA3P32297 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.02□□□□□ -1.61
CHRNA3P32297 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 AC099654.2-201ENST00000433031 1980 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CHRNA3P32297 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHRNA3P32297 SNORD96B-201ENST00000386148 79 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.02□□□□□ -1.61
CHRNA3P32297 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.02□□□□□ -1.61
CHRNA3P32297 TBCAP2-201ENST00000416175 326 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.02□□□□□ -1.61
CHRNA3P32297 AC008072.1-201ENST00000434254 824 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 XKRYP6-201ENST00000440468 1116 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 ARL4AP3-201ENST00000441452 574 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 XKRYP3-201ENST00000442113 1116 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 OR52J1P-201ENST00000450596 932 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 RPL10P17-201ENST00000453852 316 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 RPL23AP37-201ENST00000479658 549 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.02□□□□□ -1.61
CHRNA3P32297 TCP11X3P-202ENST00000514289 1254 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.02□□□□□ -1.61
CHRNA3P32297 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.02□□□□□ -1.61
CHRNA3P32297 OR10D4P-201ENST00000525892 951 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 NPM1P35-201ENST00000533043 868 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.02□□□□□ -1.61
CHRNA3P32297 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.02□□□□□ -1.61
CHRNA3P32297 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.02□□□□□ -1.61
CHRNA3P32297 COX6CP4-201ENST00000605798 228 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 AC010424.2-201ENST00000607594 443 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 AC140113.4-201ENST00000622087 222 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.02□□□□□ -1.61
CHRNA3P32297 TMEM30CP-203ENST00000637814 1035 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHRNA3P32297 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 CASC19-284ENST00000642142 1868 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.02□□□□□ -1.61
CHRNA3P32297 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHRNA3P32297 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHRNA3P32297 DDX18P4-201ENST00000511690 1966 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHRNA3P32297 AP001273.1-201ENST00000624493 3152 ntBASIC5.02□□□□□ -1.61
CHRNA3P32297 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.02□□□□□ -1.61
CHRNA3P32297 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA3P32297 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA3P32297 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.01□□□□□ -1.61
CHRNA3P32297 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA3P32297 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CHRNA3P32297 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.01□□□□□ -1.61
CHRNA3P32297 AC108751.5-201ENST00000492880 1336 ntBASIC5.01□□□□□ -1.61
CHRNA3P32297 SMG1P6-201ENST00000532337 2930 ntBASIC5.01□□□□□ -1.61
CHRNA3P32297 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHRNA3P32297 MIR7-1-201ENST00000384871 110 ntBASIC5.01□□□□□ -1.61
CHRNA3P32297 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CHRNA3P32297 AL080315.1-201ENST00000406055 466 ntBASIC5.01□□□□□ -1.61
CHRNA3P32297 MTATP6P19-201ENST00000413797 659 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms