Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.28□□□□□ -1.24
RFX1P22670 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX1P22670 TRIM60P10Y-201ENST00000425589 751 ntBASIC7.28□□□□□ -1.24
RFX1P22670 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 RPS10P21-201ENST00000430654 475 ntBASIC7.28□□□□□ -1.24
RFX1P22670 MTND3P23-201ENST00000431980 347 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 PPIAP13-201ENST00000434706 478 ntBASIC7.28□□□□□ -1.24
RFX1P22670 TRIM60P8Y-201ENST00000436338 762 ntBASIC7.28□□□□□ -1.24
RFX1P22670 GDI2P2-201ENST00000445131 608 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC007383.1-201ENST00000445875 636 ntBASIC7.28□□□□□ -1.24
RFX1P22670 MTCO1P48-201ENST00000448024 1096 ntBASIC7.28□□□□□ -1.24
RFX1P22670 MTCO1P27-201ENST00000448269 226 ntBASIC7.28□□□□□ -1.24
RFX1P22670 RPS23P9-201ENST00000448848 438 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC013267.1-201ENST00000458227 267 ntBASIC7.28□□□□□ -1.24
RFX1P22670 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.28□□□□□ -1.24
RFX1P22670 AC104339.1-201ENST00000465478 348 ntBASIC7.28□□□□□ -1.24
RFX1P22670 RN7SL216P-201ENST00000471607 298 ntBASIC7.28□□□□□ -1.24
RFX1P22670 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.28□□□□□ -1.24
RFX1P22670 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 AC114781.4-201ENST00000513707 639 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC093878.1-201ENST00000515630 432 ntBASIC7.28□□□□□ -1.24
RFX1P22670 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC7.28□□□□□ -1.24
RFX1P22670 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.28□□□□□ -1.24
RFX1P22670 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX1P22670 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 ZNF322P1-201ENST00000568013 1209 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 MIR4307-201ENST00000582802 84 ntBASIC7.28□□□□□ -1.24
RFX1P22670 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.28□□□□□ -1.24
RFX1P22670 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 AC079315.1-201ENST00000602952 623 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AL133338.2-201ENST00000604292 736 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC097468.3-201ENST00000607956 456 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 uc_338.29-201ENST00000615099 168 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC008250.2-201ENST00000615261 205 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC104010.1-201ENST00000616889 150 ntBASIC7.28□□□□□ -1.24
RFX1P22670 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX1P22670 AC006338.1-201ENST00000618453 749 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC009704.2-201ENST00000618739 483 ntBASIC7.28□□□□□ -1.24
RFX1P22670 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX1P22670 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.28□□□□□ -1.24
RFX1P22670 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 TCP11X1-202ENST00000622971 1372 ntBASIC7.28□□□□□ -1.24
RFX1P22670 AC009120.2-204ENST00000621548 2032 ntBASIC7.28□□□□□ -1.24
RFX1P22670 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX1P22670 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.28□□□□□ -1.24
RFX1P22670 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RFX1P22670 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX1P22670 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.27□□□□□ -1.24
RFX1P22670 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.27□□□□□ -1.25
RFX1P22670 AC133552.1-201ENST00000569988 4007 ntBASIC7.27□□□□□ -1.25
RFX1P22670 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
RFX1P22670 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.27□□□□□ -1.25
RFX1P22670 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.27□□□□□ -1.25
RFX1P22670 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX1P22670 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RFX1P22670 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RFX1P22670 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RFX1P22670 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX1P22670 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RFX1P22670 RNA5SP474-201ENST00000391234 90 ntBASIC7.27□□□□□ -1.25
RFX1P22670 MIR1275-201ENST00000408770 80 ntBASIC7.27□□□□□ -1.25
RFX1P22670 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 RN7SKP285-201ENST00000410137 318 ntBASIC7.27□□□□□ -1.25
RFX1P22670 SPATA20P1-201ENST00000423089 438 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC233728.2-201ENST00000425348 757 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 MTND4LP10-201ENST00000435146 291 ntBASIC7.27□□□□□ -1.25
RFX1P22670 TUBB4BP6-201ENST00000437576 479 ntBASIC7.27□□□□□ -1.25
RFX1P22670 RPL7P11-201ENST00000437586 658 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 NFU1P2-201ENST00000448700 469 ntBASIC7.27□□□□□ -1.25
RFX1P22670 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.27□□□□□ -1.25
RFX1P22670 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX1P22670 SULT1D1P-201ENST00000458020 882 ntBASIC7.27□□□□□ -1.25
RFX1P22670 RN7SL390P-201ENST00000470634 284 ntBASIC7.27□□□□□ -1.25
RFX1P22670 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms