Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCNAP12004 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCNAP12004 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCNAP12004 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PCNAP12004 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCNAP12004 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCNAP12004 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.07□□□□□ -1.6
PCNAP12004 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PCNAP12004 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCNAP12004 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCNAP12004 AC017007.4-201ENST00000503353 1352 ntBASIC5.06□□□□□ -1.6
PCNAP12004 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCNAP12004 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCNAP12004 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCNAP12004 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCNAP12004 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCNAP12004 AC234772.1-201ENST00000377927 937 ntBASIC5.06□□□□□ -1.6
PCNAP12004 RNA5SP339-201ENST00000390987 122 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AC104297.1-201ENST00000393779 870 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AP002784.2-201ENST00000397300 549 ntBASIC5.06□□□□□ -1.6
PCNAP12004 MTCO2P8-201ENST00000412213 658 ntBASIC5.06□□□□□ -1.6
PCNAP12004 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.06□□□□□ -1.6
PCNAP12004 USP12PY-201ENST00000427677 1064 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AL389925.1-201ENST00000432257 728 ntBASIC5.06□□□□□ -1.6
PCNAP12004 NOP56P2-201ENST00000447491 769 ntBASIC5.06□□□□□ -1.6
PCNAP12004 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 snoU109.3-201ENST00000459477 145 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AL133445.1-201ENST00000467051 452 ntBASIC5.06□□□□□ -1.6
PCNAP12004 RN7SL174P-201ENST00000475578 289 ntBASIC5.06□□□□□ -1.6
PCNAP12004 SIAH1P1-201ENST00000479411 923 ntBASIC5.06□□□□□ -1.6
PCNAP12004 UBA52P3-201ENST00000491303 382 ntBASIC5.06□□□□□ -1.6
PCNAP12004 TPT1P3-201ENST00000492841 512 ntBASIC5.06□□□□□ -1.6
PCNAP12004 RNA5SP228-201ENST00000516232 133 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.06□□□□□ -1.6
PCNAP12004 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.06□□□□□ -1.6
PCNAP12004 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.06□□□□□ -1.6
PCNAP12004 CYB5AP5-201ENST00000549779 389 ntBASIC5.06□□□□□ -1.6
PCNAP12004 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.06□□□□□ -1.6
PCNAP12004 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.06□□□□□ -1.6
PCNAP12004 AC040958.1-201ENST00000561102 201 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
PCNAP12004 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 AL606834.3-201ENST00000602615 496 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AL008729.2-201ENST00000606393 473 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AC109309.2-201ENST00000612597 332 ntBASIC5.06□□□□□ -1.6
PCNAP12004 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCNAP12004 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.06□□□□□ -1.6
PCNAP12004 AL049767.1-202ENST00000637826 242 ntBASIC5.06□□□□□ -1.6
PCNAP12004 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
PCNAP12004 AC090971.4-201ENST00000560291 1800 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
PCNAP12004 AL121950.1-201ENST00000624993 2077 ntBASIC5.06□□□□□ -1.6
PCNAP12004 NXF4-202ENST00000416098 1465 ntBASIC5.06□□□□□ -1.6
PCNAP12004 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PCNAP12004 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCNAP12004 AL731532.2-201ENST00000623542 1953 ntBASIC5.05□□□□□ -1.6
PCNAP12004 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCNAP12004 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PCNAP12004 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCNAP12004 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCNAP12004 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCNAP12004 RNU6-298P-201ENST00000390888 96 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AL603865.2-201ENST00000401679 213 ntBASIC5.05□□□□□ -1.6
PCNAP12004 RPS27AP11-201ENST00000402798 447 ntBASIC5.05□□□□□ -1.6
PCNAP12004 RPL35AP24-201ENST00000413846 330 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.05□□□□□ -1.6
PCNAP12004 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.05□□□□□ -1.6
PCNAP12004 PTP4A1P7-201ENST00000423476 514 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.05□□□□□ -1.6
PCNAP12004 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 AC022022.1-201ENST00000430304 178 ntBASIC5.05□□□□□ -1.6
PCNAP12004 RPL7L1P9-201ENST00000431298 745 ntBASIC5.05□□□□□ -1.6
PCNAP12004 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 GAPDHP58-201ENST00000438477 1006 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AL391987.1-201ENST00000441025 200 ntBASIC5.05□□□□□ -1.6
PCNAP12004 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.05□□□□□ -1.6
PCNAP12004 AL096803.2-201ENST00000450032 677 ntBASIC5.05□□□□□ -1.6
PCNAP12004 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCNAP12004 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 RN7SL814P-201ENST00000487715 300 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AC008427.1-201ENST00000503102 655 ntBASIC5.05□□□□□ -1.6
PCNAP12004 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms