Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 OR4A15-201ENST00000314706 1035 ntBASIC1.94□□□□□ -2.1
USH2AO75445 RNA5SP223-201ENST00000365174 120 ntBASIC1.94□□□□□ -2.1
USH2AO75445 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC1.94□□□□□ -2.1
USH2AO75445 AL590399.2-201ENST00000427536 309 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AL451139.1-201ENST00000434718 346 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AL451050.1-201ENST00000450126 415 ntBASIC1.94□□□□□ -2.1
USH2AO75445 OR9M1P-201ENST00000459641 921 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AC139783.2-201ENST00000504847 1145 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC1.94□□□□□ -2.1
USH2AO75445 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC1.94□□□□□ -2.1
USH2AO75445 ADAD1P2-201ENST00000588476 646 ntBASIC1.94□□□□□ -2.1
USH2AO75445 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 AP001153.1-201ENST00000641024 338 ntBASIC1.94□□□□□ -2.1
USH2AO75445 DMD-222ENST00000474231 5209 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
USH2AO75445 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 MIR449A-201ENST00000362113 91 ntBASIC1.94□□□□□ -2.1
USH2AO75445 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 RNA5SP80-201ENST00000410475 111 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC1.94□□□□□ -2.1
USH2AO75445 AC104651.2-201ENST00000447549 528 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC1.94□□□□□ -2.1
USH2AO75445 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC1.94□□□□□ -2.1
USH2AO75445 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 PCAT14-202ENST00000627127 3935 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AC087190.4-201ENST00000574616 8334 ntBASIC1.94□□□□□ -2.1
USH2AO75445 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 AC023632.6-201ENST00000624338 2177 ntBASIC1.94□□□□□ -2.1
USH2AO75445 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.94□□□□□ -2.1
USH2AO75445 SNORA48.5-201ENST00000391143 135 ntBASIC1.94□□□□□ -2.1
USH2AO75445 SNORA57.3-201ENST00000411095 141 ntBASIC1.94□□□□□ -2.1
USH2AO75445 FABP5P2-201ENST00000439042 408 ntBASIC1.94□□□□□ -2.1
USH2AO75445 HMGB3P9-201ENST00000441799 583 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AL049844.2-201ENST00000604280 628 ntBASIC1.94□□□□□ -2.1
USH2AO75445 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 AC125257.1-201ENST00000560400 2930 ntBASIC1.94□□□□□ -2.1
USH2AO75445 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC1.94□□□□□ -2.1
USH2AO75445 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 TET1P1-201ENST00000426627 2301 ntBASIC1.94□□□□□ -2.1
USH2AO75445 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 DMD-202ENST00000343523 5623 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 RN7SKP156-201ENST00000410308 342 ntBASIC1.94□□□□□ -2.1
USH2AO75445 AC245052.5-201ENST00000416320 649 ntBASIC1.94□□□□□ -2.1
USH2AO75445 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC1.94□□□□□ -2.1
USH2AO75445 AC011742.2-201ENST00000443818 352 ntBASIC1.94□□□□□ -2.1
USH2AO75445 BX842559.2-201ENST00000451418 605 ntBASIC1.94□□□□□ -2.1
USH2AO75445 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.94□□□□□ -2.1
USH2AO75445 AC005412.2-201ENST00000492004 341 ntBASIC1.94□□□□□ -2.1
USH2AO75445 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 AC093853.1-201ENST00000515689 483 ntBASIC1.94□□□□□ -2.1
USH2AO75445 SNORA74C-1-201ENST00000580726 201 ntBASIC1.94□□□□□ -2.1
USH2AO75445 U1.34-201ENST00000618578 162 ntBASIC1.94□□□□□ -2.1
USH2AO75445 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
USH2AO75445 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC1.94□□□□□ -2.1
USH2AO75445 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH2AO75445 EIF3EP2-201ENST00000423042 1814 ntBASIC1.93□□□□□ -2.1
USH2AO75445 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USH2AO75445 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC1.93□□□□□ -2.1
USH2AO75445 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USH2AO75445 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USH2AO75445 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC1.93□□□□□ -2.1
USH2AO75445 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC1.93□□□□□ -2.1
USH2AO75445 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USH2AO75445 RNU6-213P-201ENST00000384051 104 ntBASIC1.93□□□□□ -2.1
USH2AO75445 RPL5P23-201ENST00000496040 868 ntBASIC1.93□□□□□ -2.1
USH2AO75445 RN7SKP57-201ENST00000517248 293 ntBASIC1.93□□□□□ -2.1
USH2AO75445 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USH2AO75445 GNRHR2P1-201ENST00000555315 631 ntBASIC1.93□□□□□ -2.1
USH2AO75445 CSNK1A1P1-202ENST00000563423 981 ntBASIC1.93□□□□□ -2.1
USH2AO75445 MIR4672-201ENST00000583126 81 ntBASIC1.93□□□□□ -2.1
USH2AO75445 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC1.93□□□□□ -2.1
USH2AO75445 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
USH2AO75445 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC1.93□□□□□ -2.1
USH2AO75445 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USH2AO75445 AL591135.1-201ENST00000401578 5914 ntBASIC1.93□□□□□ -2.1
USH2AO75445 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms